Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.48□□□□□ -2.01
MUC4Q99102 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.48□□□□□ -2.01
MUC4Q99102 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MUC4Q99102 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.48□□□□□ -2.01
MUC4Q99102 AL355816.1-201ENST00000607951 118 ntBASIC2.48□□□□□ -2.01
MUC4Q99102 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.48□□□□□ -2.01
MUC4Q99102 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.48□□□□□ -2.01
MUC4Q99102 AC022960.2-201ENST00000616300 666 ntBASIC2.48□□□□□ -2.01
MUC4Q99102 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MUC4Q99102 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MUC4Q99102 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
MUC4Q99102 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MUC4Q99102 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
MUC4Q99102 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
MUC4Q99102 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.47□□□□□ -2.01
MUC4Q99102 RANP4-201ENST00000413361 655 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AL035423.1-201ENST00000420331 213 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AC092832.1-201ENST00000422934 400 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 MTCO1P52-201ENST00000433928 531 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 USP9YP7-201ENST00000436723 430 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.47□□□□□ -2.01
MUC4Q99102 USP9YP32-201ENST00000452432 430 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 NDUFB4P9-201ENST00000511646 388 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AC004024.1-201ENST00000549244 247 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AC005476.1-201ENST00000554427 397 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AL121594.4-201ENST00000556211 1196 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 BMS1P7-201ENST00000602440 1052 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AC012213.4-201ENST00000606457 354 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
MUC4Q99102 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MUC4Q99102 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MUC4Q99102 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 ZNF33CP-201ENST00000432492 2030 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
MUC4Q99102 SNORA31-201ENST00000362607 130 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 OR6K3-202ENST00000368146 996 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 SNORD3H-201ENST00000384486 214 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 RN7SKP222-201ENST00000410651 315 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AC069218.2-201ENST00000411665 344 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 LIPT1P1-201ENST00000415870 1186 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 HSFY4P-201ENST00000415994 1181 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.47□□□□□ -2.01
MUC4Q99102 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 AC010285.3-201ENST00000511668 676 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 AC026801.2-201ENST00000515352 425 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.47□□□□□ -2.01
MUC4Q99102 AC006116.10-201ENST00000591836 581 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.47□□□□□ -2.01
MUC4Q99102 AL365400.2-201ENST00000605604 902 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 MIR4278-201ENST00000636094 69 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 NMD3P1-201ENST00000439704 1488 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.47□□□□□ -2.01
MUC4Q99102 AC007496.3-201ENST00000624987 3443 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MUC4Q99102 SYT14P1-202ENST00000600441 1448 ntBASIC2.47□□□□□ -2.01
MUC4Q99102 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.46□□□□□ -2.02
MUC4Q99102 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.46□□□□□ -2.02
MUC4Q99102 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MUC4Q99102 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
MUC4Q99102 AL133383.2-201ENST00000622958 2336 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 ELL2P4-201ENST00000446870 1376 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 MIR422A-201ENST00000362286 90 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 RNU1-70P-201ENST00000362618 164 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 Y_RNA.62-201ENST00000362840 99 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MUC4Q99102 HMGB3P18-201ENST00000406327 590 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.46□□□□□ -2.02
MUC4Q99102 SETP5-201ENST00000437270 562 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 HMGB3P8-201ENST00000449709 577 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 RN7SL330P-201ENST00000469709 307 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 AC096576.1-201ENST00000489014 359 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MUC4Q99102 FABP5P12-201ENST00000515543 389 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 HIGD1AP3-201ENST00000515857 278 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.46□□□□□ -2.02
MUC4Q99102 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.46□□□□□ -2.02
MUC4Q99102 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.46□□□□□ -2.02
MUC4Q99102 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.46□□□□□ -2.02
MUC4Q99102 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.46□□□□□ -2.02
MUC4Q99102 AC006023.1-201ENST00000603944 259 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 AL592494.3-201ENST00000609485 464 ntBASIC2.46□□□□□ -2.02
MUC4Q99102 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms