Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 RNU6-657P-201ENST00000383904 107 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 NPM1P38-201ENST00000403835 865 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 CHEK2P3-201ENST00000416118 248 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 SNRPEP4-201ENST00000435815 279 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AL356276.2-201ENST00000435919 558 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 TCEA1P1-201ENST00000449716 880 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 MEMO1P4-201ENST00000453590 386 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 RN7SKP147-201ENST00000517154 244 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 SUB1P1-201ENST00000524415 382 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AP003122.3-201ENST00000526316 255 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AC011468.4-201ENST00000603942 409 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 NANOGP3-201ENST00000605855 286 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AL133216.2-202ENST00000634512 349 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 MTND4P1-201ENST00000457501 1466 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 CD36-221ENST00000534394 1741 ntTSL 2 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 Y_RNA.46-201ENST00000362695 102 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 RPL7P25-201ENST00000404151 721 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 RNU6-1304P-201ENST00000411374 106 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 RPS15AP9-201ENST00000439856 381 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 RPL10P17-201ENST00000453852 316 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 RPL37P3-201ENST00000456825 293 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AC007547.1-201ENST00000462177 490 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 RPL38P4-201ENST00000502376 214 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AC090502.2-201ENST00000549267 280 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 MIR3167-201ENST00000579623 85 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 MIR4311-201ENST00000580794 100 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AC025574.2-201ENST00000615621 514 ntBASIC9.49□□□□□ -0.89
TRIM41Q8WV44 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC9.49□□□□□ -0.89
TRIM41Q8WV44 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 Y_RNA.193-201ENST00000363979 102 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 SNORA70.9-201ENST00000384370 135 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AL136116.1-201ENST00000403591 381 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AL603908.1-201ENST00000406098 201 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 U3.36-201ENST00000408418 213 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 Y_RNA.618-201ENST00000410949 107 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 RNU6-272P-201ENST00000411028 104 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AC119751.6-201ENST00000416712 186 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 SRIP2-201ENST00000428470 166 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 MTCYBP9-201ENST00000431021 303 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 CECR9-201ENST00000453421 199 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 CACYBPP2-201ENST00000453625 678 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 PTP4A1P4-201ENST00000512479 322 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 RNU6-988P-201ENST00000519081 107 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 HIGD1AP6-201ENST00000521833 279 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 OR5M2P-201ENST00000529003 936 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 NPM1P42-201ENST00000560329 862 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 HMGB1P6-201ENST00000569046 646 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 MIR4675-201ENST00000577898 77 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AC005014.2-201ENST00000607795 599 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AC004908.2-201ENST00000609090 574 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 AC009318.4-201ENST00000620496 486 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 OR2L1P-202ENST00000641567 1023 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 ANKRD62P1-201ENST00000434304 1623 ntBASIC9.48□□□□□ -0.89
TRIM41Q8WV44 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.48□□□□□ -0.89
TRIM41Q8WV44 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms