Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 ZNF971P-201ENST00000562068 1249 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 MIR4330-201ENST00000579077 105 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 BPTFP1-201ENST00000579209 492 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC022146.1-201ENST00000595307 847 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 VN1R87P-201ENST00000596706 487 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 SNORA51-201ENST00000606420 132 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AP004247.3-201ENST00000608682 624 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RNVU1-4-201ENST00000612985 164 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 VN1R74P-201ENST00000613259 503 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC073342.3-201ENST00000624211 193 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC092184.1-201ENST00000625042 715 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 SNORA50A-202ENST00000629536 136 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 AC099654.9-201ENST00000637055 678 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 MFSD8-216ENST00000641147 4009 ntBASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC71LQ8N9Z2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC079741.1-201ENST00000321498 212 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 RNU1-132P-201ENST00000364300 164 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 OR51A3P-201ENST00000413596 924 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC069213.2-201ENST00000420238 366 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 MTND2P9-201ENST00000422293 931 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 HIGD1AP12-201ENST00000427832 281 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 CKS1BP5-201ENST00000434172 273 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 HMGB1P12-201ENST00000438594 598 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 SNORA71B-202ENST00000439232 272 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC231760.1-201ENST00000498002 260 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC105233.1-201ENST00000498840 781 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC091860.1-201ENST00000505723 432 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 HMGB3P15-201ENST00000507326 574 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 HIGD1AP3-201ENST00000515857 278 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 RNU6-488P-201ENST00000515918 99 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC010376.1-201ENST00000522101 334 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC138701.1-201ENST00000524329 714 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 OR8L1P-201ENST00000534005 955 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AL121576.1-201ENST00000556055 276 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC090330.1-201ENST00000588646 764 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AL606834.3-201ENST00000602615 496 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AL137849.1-201ENST00000604767 169 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AL021707.7-201ENST00000607991 416 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 MIR6868-201ENST00000611215 58 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 AC011944.2-201ENST00000624440 683 ntBASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCDC71LQ8N9Z2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC71LQ8N9Z2 MIR383-201ENST00000362257 73 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms