Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13CQ709C8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13CQ709C8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13CQ709C8 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13CQ709C8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13CQ709C8 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 ISCA1P2-201ENST00000438679 421 ntBASIC2.34□□□□□ -2.03
VPS13CQ709C8 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 AC026634.1-201ENST00000634369 198 ntBASIC2.34□□□□□ -2.03
VPS13CQ709C8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13CQ709C8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.34□□□□□ -2.04
VPS13CQ709C8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS13CQ709C8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
VPS13CQ709C8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC2.34□□□□□ -2.04
VPS13CQ709C8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.34□□□□□ -2.04
VPS13CQ709C8 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.34□□□□□ -2.04
VPS13CQ709C8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.34□□□□□ -2.04
VPS13CQ709C8 AC044913.1-201ENST00000557200 430 ntBASIC2.34□□□□□ -2.04
VPS13CQ709C8 AC009977.1-201ENST00000586015 570 ntBASIC2.34□□□□□ -2.04
VPS13CQ709C8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS13CQ709C8 KPNA2P2-201ENST00000419546 1489 ntBASIC2.34□□□□□ -2.04
VPS13CQ709C8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13CQ709C8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 VTA1P1-201ENST00000414044 866 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC126121.1-201ENST00000482313 553 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 MIR4648-201ENST00000580107 72 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13CQ709C8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 Y_RNA.508-201ENST00000384502 114 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 UQCRHP3-201ENST00000451503 251 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 RPL36AP21-201ENST00000490372 323 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 AP001025.2-201ENST00000490908 477 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC111000.2-201ENST00000507775 550 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC078899.3-201ENST00000599065 212 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC063923.1-201ENST00000478982 1619 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC134882.1-201ENST00000603738 1676 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13CQ709C8 RNU6-859P-201ENST00000362728 107 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 MTCO1P39-201ENST00000426148 480 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 AC114781.4-201ENST00000513707 639 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 ELF2P3-201ENST00000445099 1506 ntBASIC2.33□□□□□ -2.04
VPS13CQ709C8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VPS13CQ709C8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13CQ709C8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13CQ709C8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 GLRXP1-201ENST00000423261 334 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 MTCO1P51-201ENST00000427672 1060 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 HMGN2P3-201ENST00000433603 273 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 HMGN2P5-201ENST00000436882 273 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 MTND4P2-201ENST00000507767 1203 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC046143.2-201ENST00000609789 160 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 RPS4XP5-202ENST00000449995 1334 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13CQ709C8 MIR181A2-201ENST00000384863 110 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 OR5G4P-201ENST00000525251 760 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC244205.2-202ENST00000635781 342 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13CQ709C8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS13CQ709C8 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 RPL7P26-201ENST00000333817 754 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC105402.1-201ENST00000413336 545 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC104027.1-201ENST00000521887 300 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC244517.3-201ENST00000616254 1235 ntBASIC2.32□□□□□ -2.04
VPS13CQ709C8 AC009237.17-201ENST00000618111 748 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms