Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 DBF4P1-201ENST00000412976 1892 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 PRNCR1-201ENST00000635449 12727 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC069540.1-201ENST00000446320 988 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC092798.1-201ENST00000458542 409 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC034159.1-201ENST00000513885 583 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 MAPK10-286ENST00000641208 8747 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 AL022393.1-201ENST00000625142 1677 ntBASIC1.76□□□□□ -2.13
UBR4Q5T4S7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
UBR4Q5T4S7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 RPS6P2-201ENST00000454208 705 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 METTL15P1-201ENST00000481421 1045 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 RANP3-201ENST00000530970 276 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 MIR1273D-201ENST00000577266 86 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AL354760.1-201ENST00000608357 643 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 SMCR2_2.1-201ENST00000619783 161 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC112198.2-201ENST00000426589 6996 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 RN7SKP220-201ENST00000410611 288 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 RPL31P2-201ENST00000413849 377 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AL358075.3-201ENST00000426289 226 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC087385.1-201ENST00000475062 312 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC109458.1-201ENST00000508858 316 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 OR4R3P-201ENST00000525084 838 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 CR383658.2-201ENST00000547576 1525 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 RNU2-32P-201ENST00000411193 191 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 Z82205.1-201ENST00000428456 297 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 RNU6-295P-201ENST00000516901 104 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC011604.1-201ENST00000545978 196 ntBASIC1.75□□□□□ -2.13
UBR4Q5T4S7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
UBR4Q5T4S7 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 RNU6-666P-201ENST00000363499 107 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC023598.1-201ENST00000472521 361 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 GNAI2P1-201ENST00000541815 315 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC007342.9-201ENST00000623877 1385 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 RPL31P35-201ENST00000431058 377 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC005086.4-201ENST00000623065 213 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 MIR3199-2-201ENST00000636243 86 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms