Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.93□□□□□ -1.78
PEX3P56589 AC115621.1-201ENST00000604653 858 ntBASIC3.93□□□□□ -1.78
PEX3P56589 AC018754.1-201ENST00000607486 925 ntBASIC3.93□□□□□ -1.78
PEX3P56589 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.93□□□□□ -1.78
PEX3P56589 U6.48-201ENST00000618523 106 ntBASIC3.93□□□□□ -1.78
PEX3P56589 AC024595.1-201ENST00000623088 387 ntBASIC3.93□□□□□ -1.78
PEX3P56589 OR8B1P-202ENST00000641132 1178 ntBASIC3.93□□□□□ -1.78
PEX3P56589 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PEX3P56589 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PEX3P56589 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PEX3P56589 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PEX3P56589 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 AC066616.2-201ENST00000559334 1481 ntBASIC3.92□□□□□ -1.78
PEX3P56589 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
PEX3P56589 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PEX3P56589 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PEX3P56589 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.92□□□□□ -1.78
PEX3P56589 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 MIR122-201ENST00000385044 85 ntBASIC3.92□□□□□ -1.78
PEX3P56589 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 AL391417.1-201ENST00000404100 426 ntBASIC3.92□□□□□ -1.78
PEX3P56589 RSL24D1P1-201ENST00000404972 493 ntBASIC3.92□□□□□ -1.78
PEX3P56589 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.92□□□□□ -1.78
PEX3P56589 BMS1P19-201ENST00000433925 393 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AC073063.1-201ENST00000434352 607 ntBASIC3.92□□□□□ -1.78
PEX3P56589 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 AC092013.1-201ENST00000438795 332 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.92□□□□□ -1.78
PEX3P56589 EXTL2P1-201ENST00000446218 416 ntBASIC3.92□□□□□ -1.78
PEX3P56589 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.92□□□□□ -1.78
PEX3P56589 AL050341.1-201ENST00000447743 313 ntBASIC3.92□□□□□ -1.78
PEX3P56589 ANP32BP2-201ENST00000454525 545 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.92□□□□□ -1.78
PEX3P56589 AC084357.1-201ENST00000473404 255 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.92□□□□□ -1.78
PEX3P56589 AL035404.1-201ENST00000497982 568 ntBASIC3.92□□□□□ -1.78
PEX3P56589 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 RNU6-579P-201ENST00000516879 102 ntBASIC3.92□□□□□ -1.78
PEX3P56589 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.92□□□□□ -1.78
PEX3P56589 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.92□□□□□ -1.78
PEX3P56589 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.92□□□□□ -1.78
PEX3P56589 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.92□□□□□ -1.78
PEX3P56589 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.92□□□□□ -1.78
PEX3P56589 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.92□□□□□ -1.78
PEX3P56589 ATP5F1P7-201ENST00000567330 760 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.92□□□□□ -1.78
PEX3P56589 PSMA6P4-201ENST00000603247 718 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AC099785.1-201ENST00000605697 437 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AP002802.2-201ENST00000605877 235 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.92□□□□□ -1.78
PEX3P56589 AC097504.2-201ENST00000608088 454 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AP000240.1-201ENST00000609910 452 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AC124016.2-201ENST00000610058 665 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AL512427.1-201ENST00000618593 349 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AP003355.3-201ENST00000623465 114 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AP003476.1-201ENST00000623984 516 ntBASIC3.92□□□□□ -1.78
PEX3P56589 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.92□□□□□ -1.78
PEX3P56589 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.92□□□□□ -1.78
PEX3P56589 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 MTND4P31-201ENST00000425607 1343 ntBASIC3.92□□□□□ -1.78
PEX3P56589 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PEX3P56589 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.91□□□□□ -1.78
PEX3P56589 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PEX3P56589 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
PEX3P56589 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 RNU1-85P-201ENST00000364127 164 ntBASIC3.91□□□□□ -1.78
PEX3P56589 RNU6-283P-201ENST00000364788 107 ntBASIC3.91□□□□□ -1.78
PEX3P56589 MIR23B-201ENST00000384832 97 ntBASIC3.91□□□□□ -1.78
PEX3P56589 MIR218-2-201ENST00000385006 110 ntBASIC3.91□□□□□ -1.78
PEX3P56589 U3.39-201ENST00000408569 239 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AC092745.2-202ENST00000411880 369 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.91□□□□□ -1.78
PEX3P56589 MTND4P22-201ENST00000413116 1169 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.91□□□□□ -1.78
PEX3P56589 AC114814.2-201ENST00000419195 485 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AC017083.1-201ENST00000428093 483 ntBASIC3.91□□□□□ -1.78
PEX3P56589 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.91□□□□□ -1.78
PEX3P56589 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PEX3P56589 AL365440.1-201ENST00000436135 2167 ntBASIC3.91□□□□□ -1.78
PEX3P56589 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.91□□□□□ -1.78
PEX3P56589 AC009263.1-201ENST00000441193 1239 ntBASIC3.91□□□□□ -1.78
PEX3P56589 RPL21P23-201ENST00000446654 460 ntBASIC3.91□□□□□ -1.78
PEX3P56589 SEPT14P24-201ENST00000447236 180 ntBASIC3.91□□□□□ -1.78
PEX3P56589 VN1R34P-201ENST00000447387 883 ntBASIC3.91□□□□□ -1.78
PEX3P56589 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms