Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH11P55287 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 GTF2IP8-201ENST00000560687 584 ntBASIC3.87□□□□□ -1.79
CDH11P55287 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH11P55287 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH11P55287 MIR4716-201ENST00000579628 84 ntBASIC3.87□□□□□ -1.79
CDH11P55287 MIR3939-201ENST00000582614 106 ntBASIC3.87□□□□□ -1.79
CDH11P55287 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH11P55287 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH11P55287 IPO5P1-202ENST00000600039 287 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AL390838.2-201ENST00000602394 274 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC021171.1-201ENST00000603137 706 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AL360219.1-201ENST00000610230 366 ntBASIC3.87□□□□□ -1.79
CDH11P55287 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH11P55287 AC103858.2-201ENST00000621471 543 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AL512506.2-201ENST00000624472 458 ntBASIC3.87□□□□□ -1.79
CDH11P55287 AC026634.1-201ENST00000634369 198 ntBASIC3.87□□□□□ -1.79
CDH11P55287 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH11P55287 MTND5P31-201ENST00000419366 1374 ntBASIC3.87□□□□□ -1.79
CDH11P55287 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CDH11P55287 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH11P55287 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH11P55287 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CDH11P55287 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CDH11P55287 AC007529.1-201ENST00000418574 2178 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AL356489.2-201ENST00000566968 3528 ntBASIC3.86□□□□□ -1.79
CDH11P55287 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH11P55287 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH11P55287 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH11P55287 RNU5D-1-201ENST00000363299 116 ntBASIC3.86□□□□□ -1.79
CDH11P55287 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 RNU6-1279P-201ENST00000383917 103 ntBASIC3.86□□□□□ -1.79
CDH11P55287 MIR3074-201ENST00000384885 81 ntBASIC3.86□□□□□ -1.79
CDH11P55287 MIR3065-201ENST00000390137 79 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AL356967.1-201ENST00000406305 431 ntBASIC3.86□□□□□ -1.79
CDH11P55287 RNU2-42P-201ENST00000410697 113 ntBASIC3.86□□□□□ -1.79
CDH11P55287 RNA5SP306-201ENST00000411087 107 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC068533.2-201ENST00000411872 306 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC092647.1-201ENST00000420654 287 ntBASIC3.86□□□□□ -1.79
CDH11P55287 CYP4F29P-201ENST00000420685 446 ntBASIC3.86□□□□□ -1.79
CDH11P55287 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 EIF1P3-201ENST00000423841 334 ntBASIC3.86□□□□□ -1.79
CDH11P55287 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 RPS29P17-201ENST00000430795 166 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC005345.1-201ENST00000431868 217 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 B3GNT2P1-201ENST00000434960 952 ntBASIC3.86□□□□□ -1.79
CDH11P55287 RPL12P46-201ENST00000436610 195 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC241584.1-201ENST00000438469 1241 ntBASIC3.86□□□□□ -1.79
CDH11P55287 RPL23AP89-201ENST00000439324 255 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 ANKRD26P4-201ENST00000455755 950 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 AC010618.1-201ENST00000469924 477 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 AC104164.2-201ENST00000496953 495 ntBASIC3.86□□□□□ -1.79
CDH11P55287 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH11P55287 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH11P55287 RPL7L1P13-201ENST00000511702 739 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 OR5BC1P-201ENST00000529327 739 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH11P55287 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH11P55287 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH11P55287 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 AC009712.1-201ENST00000564938 316 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC093519.1-201ENST00000566109 298 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 AC011477.5-201ENST00000586571 259 ntBASIC3.86□□□□□ -1.79
CDH11P55287 DPRXP5-201ENST00000604662 539 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC090948.2-201ENST00000607363 564 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH11P55287 AC023043.4-201ENST00000612081 449 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AL359535.1-201ENST00000612100 1087 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AL139418.1-201ENST00000613613 177 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC007546.1-201ENST00000619452 559 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AC091304.6-201ENST00000619761 202 ntBASIC3.86□□□□□ -1.79
CDH11P55287 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 MIR7702-201ENST00000621931 59 ntBASIC3.86□□□□□ -1.79
CDH11P55287 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.86□□□□□ -1.79
CDH11P55287 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH11P55287 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH11P55287 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH11P55287 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDH11P55287 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.86□□□□□ -1.79
CDH11P55287 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDH11P55287 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH11P55287 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CDH11P55287 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
CDH11P55287 Z73965.1-201ENST00000623412 2297 ntBASIC3.86□□□□□ -1.79
CDH11P55287 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH11P55287 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 299.4 ms