Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 MIR6748-201ENST00000610433 71 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 AL354976.1-201ENST00000613843 387 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 MLECP1-201ENST00000615893 709 ntBASIC3.3□□□□□ -1.88
ATP1B3P54709 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP1B3P54709 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP1B3P54709 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATP1B3P54709 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP1B3P54709 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP1B3P54709 AP001350.1-201ENST00000601906 1524 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 RNU6-354P-201ENST00000383862 107 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 RNU6-610P-201ENST00000384264 107 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 Y_RNA.493-201ENST00000384422 102 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 RNU6-549P-201ENST00000384433 107 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 MIR199A2-201ENST00000385289 110 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 RPL31P1-201ENST00000398116 372 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AL022722.2-201ENST00000402519 180 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 HIGD1AP12-201ENST00000427832 281 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 TBCAP1-201ENST00000436520 327 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 RNU7-140P-201ENST00000459546 60 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AC004801.2-202ENST00000463559 283 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AC010618.1-201ENST00000469924 477 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 UBE2CP3-201ENST00000502715 450 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP1B3P54709 HMGB1P22-201ENST00000505315 124 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP1B3P54709 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.29□□□□□ -1.88
ATP1B3P54709 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 AC244505.7-201ENST00000599675 272 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AC005776.1-201ENST00000603164 290 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP1B3P54709 AL390816.3-201ENST00000604527 1066 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AL137849.1-201ENST00000604767 169 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.29□□□□□ -1.88
ATP1B3P54709 MIR6716-201ENST00000613413 80 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP1B3P54709 AC098679.5-201ENST00000624394 571 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.29□□□□□ -1.88
ATP1B3P54709 MIR492-201ENST00000638676 116 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 OR6C71P-202ENST00000641886 1107 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 RLIMP1-201ENST00000339626 1680 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP1B3P54709 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
ATP1B3P54709 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.29□□□□□ -1.88
ATP1B3P54709 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP1B3P54709 AL021368.2-201ENST00000606125 5352 ntBASIC3.29□□□□□ -1.88
ATP1B3P54709 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
ATP1B3P54709 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.28□□□□□ -1.88
ATP1B3P54709 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATP1B3P54709 PRO1804-201ENST00000623780 2050 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATP1B3P54709 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.28□□□□□ -1.88
ATP1B3P54709 AP001148.1-201ENST00000624124 2359 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ATP1B3P54709 RNU1-85P-201ENST00000364127 164 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 RPL21P65-201ENST00000406094 466 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 AL583834.1-201ENST00000406943 343 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP1B3P54709 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.28□□□□□ -1.88
ATP1B3P54709 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATP1B3P54709 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP1B3P54709 HMGB1P12-201ENST00000438594 598 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.28□□□□□ -1.88
ATP1B3P54709 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP1B3P54709 AC044797.1-201ENST00000445744 679 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 AL096829.2-201ENST00000446582 742 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 RPL7P59-201ENST00000447700 943 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 AC004022.1-201ENST00000447766 1066 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP1B3P54709 AC104073.1-201ENST00000451988 151 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 RPS7P7-201ENST00000463499 571 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATP1B3P54709 AC084198.1-201ENST00000477747 402 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 RPS4XP13-201ENST00000483219 789 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 NIPA2P2-201ENST00000496376 1083 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 AC118282.2-201ENST00000508739 374 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 MTCO3P44-201ENST00000510977 541 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 RNU6-334P-201ENST00000517072 102 ntBASIC3.28□□□□□ -1.88
ATP1B3P54709 NDUFA5P2-201ENST00000519723 344 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms