Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.96□□□□□ -1.94
SRP9P49458 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
SRP9P49458 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.96□□□□□ -1.94
SRP9P49458 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.95□□□□□ -1.94
SRP9P49458 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SRP9P49458 ZNF33CP-201ENST00000432492 2030 ntBASIC2.95□□□□□ -1.94
SRP9P49458 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SRP9P49458 MTND5P7-201ENST00000413558 1798 ntBASIC2.95□□□□□ -1.94
SRP9P49458 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SRP9P49458 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.95□□□□□ -1.94
SRP9P49458 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SRP9P49458 RNU1-101P-201ENST00000391171 127 ntBASIC2.95□□□□□ -1.94
SRP9P49458 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.95□□□□□ -1.94
SRP9P49458 DBIP2-201ENST00000419076 262 ntBASIC2.95□□□□□ -1.94
SRP9P49458 SDCBPP3-201ENST00000419629 891 ntBASIC2.95□□□□□ -1.94
SRP9P49458 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SRP9P49458 SSXP4-201ENST00000451349 245 ntBASIC2.95□□□□□ -1.94
SRP9P49458 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.95□□□□□ -1.94
SRP9P49458 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SRP9P49458 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.95□□□□□ -1.94
SRP9P49458 POU5F1P7-201ENST00000508759 541 ntBASIC2.95□□□□□ -1.94
SRP9P49458 RN7SKP244-201ENST00000516513 307 ntBASIC2.95□□□□□ -1.94
SRP9P49458 DUXAP2-201ENST00000519198 589 ntBASIC2.95□□□□□ -1.94
SRP9P49458 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.95□□□□□ -1.94
SRP9P49458 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.95□□□□□ -1.94
SRP9P49458 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
SRP9P49458 AL392088.2-201ENST00000637607 285 ntBASIC2.95□□□□□ -1.94
SRP9P49458 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SRP9P49458 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
SRP9P49458 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SRP9P49458 RNF6P1-201ENST00000444889 1784 ntBASIC2.95□□□□□ -1.94
SRP9P49458 AC107081.3-201ENST00000612715 2034 ntBASIC2.94□□□□□ -1.94
SRP9P49458 U3.11-201ENST00000364476 212 ntBASIC2.94□□□□□ -1.94
SRP9P49458 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SRP9P49458 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SRP9P49458 RSL24D1P1-201ENST00000404972 493 ntBASIC2.94□□□□□ -1.94
SRP9P49458 RPL5P18-201ENST00000406671 891 ntBASIC2.94□□□□□ -1.94
SRP9P49458 SNORA81-201ENST00000408493 178 ntBASIC2.94□□□□□ -1.94
SRP9P49458 RN7SKP111-201ENST00000410349 271 ntBASIC2.94□□□□□ -1.94
SRP9P49458 RPS7P15-201ENST00000415804 584 ntBASIC2.94□□□□□ -1.94
SRP9P49458 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.94□□□□□ -1.94
SRP9P49458 RPL21P40-201ENST00000428586 483 ntBASIC2.94□□□□□ -1.94
SRP9P49458 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.94□□□□□ -1.94
SRP9P49458 AC097262.1-201ENST00000452559 548 ntBASIC2.94□□□□□ -1.94
SRP9P49458 RBMY2UP-201ENST00000453474 324 ntBASIC2.94□□□□□ -1.94
SRP9P49458 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.94□□□□□ -1.94
SRP9P49458 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.94□□□□□ -1.94
SRP9P49458 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.94□□□□□ -1.94
SRP9P49458 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.94□□□□□ -1.94
SRP9P49458 FCF1P8-201ENST00000510322 597 ntBASIC2.94□□□□□ -1.94
SRP9P49458 SCARNA20.6-201ENST00000517251 106 ntBASIC2.94□□□□□ -1.94
SRP9P49458 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.94□□□□□ -1.94
SRP9P49458 AF279873.1-201ENST00000523393 313 ntBASIC2.94□□□□□ -1.94
SRP9P49458 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
SRP9P49458 AC025423.2-201ENST00000537570 439 ntBASIC2.94□□□□□ -1.94
SRP9P49458 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.94□□□□□ -1.94
SRP9P49458 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.94□□□□□ -1.94
SRP9P49458 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.94□□□□□ -1.94
SRP9P49458 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.94□□□□□ -1.94
SRP9P49458 AC067852.3-201ENST00000589177 561 ntBASIC2.94□□□□□ -1.94
SRP9P49458 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.94□□□□□ -1.94
SRP9P49458 AL355816.1-201ENST00000607951 118 ntBASIC2.94□□□□□ -1.94
SRP9P49458 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SRP9P49458 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SRP9P49458 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.94□□□□□ -1.94
SRP9P49458 GTF2H2B-203ENST00000508065 1432 ntBASIC2.93□□□□□ -1.94
SRP9P49458 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SRP9P49458 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.93□□□□□ -1.94
SRP9P49458 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SRP9P49458 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.93□□□□□ -1.94
SRP9P49458 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP9P49458 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SRP9P49458 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SRP9P49458 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP9P49458 MIR7-3-201ENST00000384898 110 ntBASIC2.93□□□□□ -1.94
SRP9P49458 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
SRP9P49458 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.93□□□□□ -1.94
SRP9P49458 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.93□□□□□ -1.94
SRP9P49458 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.93□□□□□ -1.94
SRP9P49458 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
SRP9P49458 AC007899.1-201ENST00000412776 775 ntBASIC2.93□□□□□ -1.94
SRP9P49458 RPL21P112-201ENST00000434403 463 ntBASIC2.93□□□□□ -1.94
SRP9P49458 AC044797.1-201ENST00000445744 679 ntBASIC2.93□□□□□ -1.94
SRP9P49458 CYCSP35-201ENST00000451978 304 ntBASIC2.93□□□□□ -1.94
SRP9P49458 AC146507.2-201ENST00000460608 476 ntBASIC2.93□□□□□ -1.94
SRP9P49458 RPL37P6-202ENST00000464216 403 ntBASIC2.93□□□□□ -1.94
SRP9P49458 VN1R17P-201ENST00000472048 1090 ntBASIC2.93□□□□□ -1.94
SRP9P49458 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP9P49458 RN7SL283P-201ENST00000489055 303 ntBASIC2.93□□□□□ -1.94
SRP9P49458 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SRP9P49458 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.93□□□□□ -1.94
SRP9P49458 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.93□□□□□ -1.94
SRP9P49458 RNU4-60P-201ENST00000517239 135 ntBASIC2.93□□□□□ -1.94
SRP9P49458 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.93□□□□□ -1.94
SRP9P49458 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.93□□□□□ -1.94
SRP9P49458 AC239860.2-201ENST00000525886 270 ntBASIC2.93□□□□□ -1.94
SRP9P49458 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
SRP9P49458 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP9P49458 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.93□□□□□ -1.94
SRP9P49458 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms