Protein–RNA interactions for Protein: P48681

NES, Nestin, humanhuman

Predictions only

Length 1,621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NESP48681 MIR4727-201ENST00000622232 55 ntBASIC5.05□□□□□ -1.6
NESP48681 AC006840.1-201ENST00000623069 542 ntBASIC5.05□□□□□ -1.6
NESP48681 AC099063.3-201ENST00000642066 185 ntBASIC5.05□□□□□ -1.6
NESP48681 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NESP48681 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NESP48681 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NESP48681 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NESP48681 RPL7P26-201ENST00000333817 754 ntBASIC5.04□□□□□ -1.6
NESP48681 AL591806.2-201ENST00000433122 173 ntBASIC5.04□□□□□ -1.6
NESP48681 MTND2P25-201ENST00000449028 610 ntBASIC5.04□□□□□ -1.6
NESP48681 AC078785.3-201ENST00000476607 425 ntBASIC5.04□□□□□ -1.6
NESP48681 AC019227.1-201ENST00000526902 510 ntBASIC5.04□□□□□ -1.6
NESP48681 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.04□□□□□ -1.6
NESP48681 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NESP48681 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NESP48681 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NESP48681 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NESP48681 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NESP48681 RPS3AP26-201ENST00000398259 784 ntBASIC5.03□□□□□ -1.6
NESP48681 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.03□□□□□ -1.6
NESP48681 AC010468.1-201ENST00000461022 817 ntBASIC5.03□□□□□ -1.6
NESP48681 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.03□□□□□ -1.6
NESP48681 RN7SKP283-201ENST00000517197 270 ntBASIC5.03□□□□□ -1.6
NESP48681 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.03□□□□□ -1.6
NESP48681 AC103798.2-201ENST00000624292 632 ntBASIC5.03□□□□□ -1.6
NESP48681 AC087190.4-201ENST00000574616 8334 ntBASIC5.03□□□□□ -1.6
NESP48681 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NESP48681 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
NESP48681 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NESP48681 AC007496.3-201ENST00000624987 3443 ntBASIC5.02□□□□□ -1.61
NESP48681 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NESP48681 AC110754.1-201ENST00000399740 601 ntBASIC5.02□□□□□ -1.61
NESP48681 AP001025.2-201ENST00000490908 477 ntBASIC5.02□□□□□ -1.61
NESP48681 AC018797.3-201ENST00000513388 1241 ntBASIC5.02□□□□□ -1.61
NESP48681 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.02□□□□□ -1.61
NESP48681 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.02□□□□□ -1.61
NESP48681 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.02□□□□□ -1.61
NESP48681 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.02□□□□□ -1.61
NESP48681 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.02□□□□□ -1.61
NESP48681 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NESP48681 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
NESP48681 AL139039.1-201ENST00000401900 692 ntBASIC5.01□□□□□ -1.61
NESP48681 RPS4XP7-201ENST00000406274 780 ntBASIC5.01□□□□□ -1.61
NESP48681 UBE2D3P1-201ENST00000436669 444 ntBASIC5.01□□□□□ -1.61
NESP48681 AP001646.1-201ENST00000527936 915 ntBASIC5.01□□□□□ -1.61
NESP48681 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NESP48681 AL442163.2-201ENST00000553912 710 ntBASIC5.01□□□□□ -1.61
NESP48681 DNAJC19P3-201ENST00000594491 331 ntBASIC5.01□□□□□ -1.61
NESP48681 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NESP48681 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.01□□□□□ -1.61
NESP48681 MIR512-1-201ENST00000384913 84 ntBASIC5.01□□□□□ -1.61
NESP48681 SYT14P1-201ENST00000481459 721 ntBASIC5.01□□□□□ -1.61
NESP48681 FAM172BP-201ENST00000487497 1089 ntBASIC5.01□□□□□ -1.61
NESP48681 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.01□□□□□ -1.61
NESP48681 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.01□□□□□ -1.61
NESP48681 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.01□□□□□ -1.61
NESP48681 MIR4738-201ENST00000579134 87 ntBASIC5.01□□□□□ -1.61
NESP48681 AC091903.1-201ENST00000624322 454 ntBASIC5.01□□□□□ -1.61
NESP48681 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.01□□□□□ -1.61
NESP48681 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5□□□□□ -1.61
NESP48681 B3GNT2P1-201ENST00000434960 952 ntBASIC5□□□□□ -1.61
NESP48681 AC010307.1-201ENST00000467206 836 ntBASIC5□□□□□ -1.61
NESP48681 AC108210.2-201ENST00000503681 201 ntBASIC5□□□□□ -1.61
NESP48681 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5□□□□□ -1.61
NESP48681 AC015712.3-201ENST00000559380 164 ntBASIC5□□□□□ -1.61
NESP48681 DEFB122-202ENST00000569013 197 ntBASIC5□□□□□ -1.61
NESP48681 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5□□□□□ -1.61
NESP48681 AL034351.1-201ENST00000605288 668 ntBASIC5□□□□□ -1.61
NESP48681 AL354950.1-201ENST00000614150 568 ntBASIC5□□□□□ -1.61
NESP48681 AC022509.4-201ENST00000621404 572 ntBASIC5□□□□□ -1.61
NESP48681 AL359715.5-201ENST00000623431 443 ntBASIC5□□□□□ -1.61
NESP48681 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NESP48681 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC5□□□□□ -1.61
NESP48681 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.99□□□□□ -1.61
NESP48681 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.99□□□□□ -1.61
NESP48681 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.99□□□□□ -1.61
NESP48681 AC108206.1-201ENST00000570186 4159 ntBASIC4.99□□□□□ -1.61
NESP48681 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NESP48681 RNU1-89P-201ENST00000384592 164 ntBASIC4.99□□□□□ -1.61
NESP48681 U3.42-201ENST00000408746 214 ntBASIC4.99□□□□□ -1.61
NESP48681 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NESP48681 AL031736.2-201ENST00000426573 787 ntBASIC4.99□□□□□ -1.61
NESP48681 PCBP2P3-201ENST00000509726 843 ntBASIC4.99□□□□□ -1.61
NESP48681 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.99□□□□□ -1.61
NESP48681 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.99□□□□□ -1.61
NESP48681 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NESP48681 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
NESP48681 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NESP48681 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NESP48681 HSPA8P4-201ENST00000511877 1920 ntBASIC4.98□□□□□ -1.61
NESP48681 RN7SKP192-201ENST00000411291 327 ntBASIC4.98□□□□□ -1.61
NESP48681 HMGB3P12-201ENST00000438745 556 ntBASIC4.98□□□□□ -1.61
NESP48681 HMGB1P19-201ENST00000517578 577 ntBASIC4.98□□□□□ -1.61
NESP48681 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.98□□□□□ -1.61
NESP48681 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
NESP48681 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NESP48681 RNU6-482P-201ENST00000391068 107 ntBASIC4.97□□□□□ -1.61
NESP48681 AL138827.1-201ENST00000402666 306 ntBASIC4.97□□□□□ -1.61
NESP48681 RNA5SP21-201ENST00000410917 96 ntBASIC4.97□□□□□ -1.61
NESP48681 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms