Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC096644.4-201ENST00000563417 2912 ntBASIC3.11□□□□□ -1.91
HTTP42858 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HTTP42858 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
HTTP42858 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 Y_RNA.508-201ENST00000384502 114 ntBASIC3.11□□□□□ -1.91
HTTP42858 VTA1P1-201ENST00000414044 866 ntBASIC3.11□□□□□ -1.91
HTTP42858 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.11□□□□□ -1.91
HTTP42858 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.11□□□□□ -1.91
HTTP42858 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.11□□□□□ -1.91
HTTP42858 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HTTP42858 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HTTP42858 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.11□□□□□ -1.91
HTTP42858 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.11□□□□□ -1.91
HTTP42858 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HTTP42858 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HTTP42858 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
HTTP42858 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.1□□□□□ -1.91
HTTP42858 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
HTTP42858 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
HTTP42858 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HTTP42858 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HTTP42858 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.1□□□□□ -1.91
HTTP42858 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HTTP42858 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.1□□□□□ -1.91
HTTP42858 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
HTTP42858 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HTTP42858 UBE2V2P4-201ENST00000447495 259 ntBASIC3.1□□□□□ -1.91
HTTP42858 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.1□□□□□ -1.91
HTTP42858 RNA5SP458-201ENST00000516188 119 ntBASIC3.1□□□□□ -1.91
HTTP42858 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.1□□□□□ -1.91
HTTP42858 AC123768.4-201ENST00000616244 701 ntBASIC3.1□□□□□ -1.91
HTTP42858 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.1□□□□□ -1.91
HTTP42858 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HTTP42858 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HTTP42858 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.1□□□□□ -1.91
HTTP42858 AC078817.1-201ENST00000492623 435 ntBASIC3.1□□□□□ -1.91
HTTP42858 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.1□□□□□ -1.91
HTTP42858 MIR1273D-201ENST00000577266 86 ntBASIC3.1□□□□□ -1.91
HTTP42858 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HTTP42858 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HTTP42858 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.09□□□□□ -1.91
HTTP42858 RNA5SP31-201ENST00000411144 127 ntBASIC3.09□□□□□ -1.91
HTTP42858 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.09□□□□□ -1.91
HTTP42858 HMGB3P12-201ENST00000438745 556 ntBASIC3.09□□□□□ -1.91
HTTP42858 AC245517.4-201ENST00000448601 281 ntBASIC3.09□□□□□ -1.91
HTTP42858 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
HTTP42858 RPL7P20-201ENST00000520308 745 ntBASIC3.09□□□□□ -1.91
HTTP42858 NTAN1P1-201ENST00000603150 646 ntBASIC3.09□□□□□ -1.91
HTTP42858 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HTTP42858 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.09□□□□□ -1.92
HTTP42858 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.09□□□□□ -1.92
HTTP42858 AC092447.2-201ENST00000435487 669 ntBASIC3.09□□□□□ -1.92
HTTP42858 AC124916.1-201ENST00000444020 547 ntBASIC3.09□□□□□ -1.92
HTTP42858 RPL29P29-201ENST00000448725 423 ntBASIC3.09□□□□□ -1.92
HTTP42858 RPL23AP15-201ENST00000450202 459 ntBASIC3.09□□□□□ -1.92
HTTP42858 MTCO3P16-201ENST00000454456 754 ntBASIC3.09□□□□□ -1.92
HTTP42858 RPL5P30-201ENST00000465511 891 ntBASIC3.09□□□□□ -1.92
HTTP42858 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.09□□□□□ -1.92
HTTP42858 AP002770.2-201ENST00000543613 532 ntBASIC3.09□□□□□ -1.92
HTTP42858 AC092608.2-201ENST00000624427 218 ntBASIC3.09□□□□□ -1.92
HTTP42858 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HTTP42858 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HTTP42858 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.09□□□□□ -1.92
HTTP42858 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HTTP42858 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HTTP42858 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HTTP42858 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HTTP42858 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.08□□□□□ -1.92
HTTP42858 TCP11X3P-202ENST00000514289 1254 ntBASIC3.08□□□□□ -1.92
HTTP42858 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.08□□□□□ -1.92
HTTP42858 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.08□□□□□ -1.92
HTTP42858 AC016727.1-205ENST00000605437 569 ntBASIC3.08□□□□□ -1.92
HTTP42858 CTSLP2-204ENST00000629029 392 ntBASIC3.08□□□□□ -1.92
HTTP42858 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.08□□□□□ -1.92
HTTP42858 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HTTP42858 TCP1P3-201ENST00000414406 1498 ntBASIC3.08□□□□□ -1.92
HTTP42858 Z98742.3-201ENST00000418637 326 ntBASIC3.08□□□□□ -1.92
HTTP42858 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.08□□□□□ -1.92
HTTP42858 MTND4P2-201ENST00000507767 1203 ntBASIC3.08□□□□□ -1.92
HTTP42858 UBTFL10-201ENST00000528532 562 ntBASIC3.08□□□□□ -1.92
HTTP42858 AP001004.1-201ENST00000582468 324 ntBASIC3.08□□□□□ -1.92
HTTP42858 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.08□□□□□ -1.92
HTTP42858 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.08□□□□□ -1.92
HTTP42858 AC009039.2-201ENST00000624524 529 ntBASIC3.08□□□□□ -1.92
HTTP42858 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.08□□□□□ -1.92
HTTP42858 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HTTP42858 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.08□□□□□ -1.92
HTTP42858 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HTTP42858 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HTTP42858 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.08□□□□□ -1.92
HTTP42858 AP000867.2-201ENST00000532468 320 ntBASIC3.08□□□□□ -1.92
HTTP42858 GABRG2-229ENST00000641017 3628 ntBASIC3.08□□□□□ -1.92
HTTP42858 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HTTP42858 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HTTP42858 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms