Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.13□□□□□ -1.91
CEACAM3P40198 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.13□□□□□ -1.91
CEACAM3P40198 AC010733.2-201ENST00000589496 5702 ntBASIC3.13□□□□□ -1.91
CEACAM3P40198 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CEACAM3P40198 AC008432.1-201ENST00000615912 1320 ntBASIC3.13□□□□□ -1.91
CEACAM3P40198 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CEACAM3P40198 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CEACAM3P40198 LINC00561-201ENST00000565815 2738 ntBASIC3.13□□□□□ -1.91
CEACAM3P40198 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CEACAM3P40198 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 RPL7P26-201ENST00000333817 754 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 RNU1-18P-201ENST00000363062 164 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 RNU6-1339P-201ENST00000363574 91 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 RNU4-27P-201ENST00000410889 139 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.12□□□□□ -1.91
CEACAM3P40198 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.12□□□□□ -1.91
CEACAM3P40198 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.12□□□□□ -1.91
CEACAM3P40198 ELOCP13-201ENST00000443934 329 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.12□□□□□ -1.91
CEACAM3P40198 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 RPS17P13-201ENST00000448974 407 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.12□□□□□ -1.91
CEACAM3P40198 DNAJC19P8-201ENST00000452887 259 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.12□□□□□ -1.91
CEACAM3P40198 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.12□□□□□ -1.91
CEACAM3P40198 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.12□□□□□ -1.91
CEACAM3P40198 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 AC012181.1-201ENST00000479895 423 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 RN7SKP96-201ENST00000516948 297 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.12□□□□□ -1.91
CEACAM3P40198 SUMO2P20-201ENST00000520803 283 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.12□□□□□ -1.91
CEACAM3P40198 AC104115.2-201ENST00000523026 687 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.12□□□□□ -1.91
CEACAM3P40198 OR8K2P-201ENST00000524645 927 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.12□□□□□ -1.91
CEACAM3P40198 AC010198.2-201ENST00000550612 259 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.12□□□□□ -1.91
CEACAM3P40198 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.12□□□□□ -1.91
CEACAM3P40198 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 AC011492.1-201ENST00000600023 315 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 IGHV3-29-201ENST00000604817 344 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AL021368.1-201ENST00000607490 540 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AL450489.1-201ENST00000612071 468 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 RMST_10.1-201ENST00000616309 154 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AL354798.1-201ENST00000622505 329 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 SNORA50A-202ENST00000629536 136 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AC017104.5-201ENST00000637647 639 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AP001350.1-201ENST00000601906 1524 ntBASIC3.12□□□□□ -1.91
CEACAM3P40198 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.12□□□□□ -1.91
CEACAM3P40198 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.12□□□□□ -1.91
CEACAM3P40198 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CEACAM3P40198 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CEACAM3P40198 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CEACAM3P40198 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
CEACAM3P40198 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CEACAM3P40198 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CEACAM3P40198 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CEACAM3P40198 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CEACAM3P40198 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CEACAM3P40198 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CEACAM3P40198 HMGN2P8-201ENST00000391458 268 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 MIR1193-201ENST00000408109 78 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 SNORA57.3-201ENST00000411095 141 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 HMGB3P23-201ENST00000414981 585 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.11□□□□□ -1.91
CEACAM3P40198 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.11□□□□□ -1.91
CEACAM3P40198 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CEACAM3P40198 AL590103.1-201ENST00000434488 307 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 AL512661.1-201ENST00000434586 1253 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 UBE2V1P5-201ENST00000440070 405 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.11□□□□□ -1.91
CEACAM3P40198 AC006480.1-201ENST00000449887 378 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 MTCO3P20-201ENST00000454926 688 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.11□□□□□ -1.91
CEACAM3P40198 AC010307.1-201ENST00000467206 836 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CEACAM3P40198 AC007688.1-201ENST00000475592 759 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 AC015724.1-201ENST00000478577 156 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 RPL21P47-201ENST00000483696 477 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 RPL23AP55-201ENST00000498163 452 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.11□□□□□ -1.91
CEACAM3P40198 AC016065.2-201ENST00000514530 444 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 MTCO2P32-201ENST00000514865 403 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 HIGD1AP3-201ENST00000515857 278 ntBASIC3.11□□□□□ -1.91
CEACAM3P40198 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.11□□□□□ -1.91
CEACAM3P40198 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms