Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 XPOTP1-201ENST00000443317 2398 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.95□□□□□ -1.46
NFKB1P19838 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 Y_RNA.47-201ENST00000362697 108 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 RN7SKP78-201ENST00000364711 318 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AC016739.1-201ENST00000405359 345 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AC048351.1-201ENST00000420064 602 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.95□□□□□ -1.46
NFKB1P19838 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.95□□□□□ -1.46
NFKB1P19838 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.95□□□□□ -1.46
NFKB1P19838 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.95□□□□□ -1.46
NFKB1P19838 AL035666.1-201ENST00000446195 348 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.95□□□□□ -1.46
NFKB1P19838 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 Z83838.1-202ENST00000456225 839 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AL049714.1-201ENST00000466686 347 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 RN7SL193P-201ENST00000491708 276 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 AC092436.1-201ENST00000506450 503 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.95□□□□□ -1.46
NFKB1P19838 SCARNA18.1-201ENST00000516330 83 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 RNU6-273P-201ENST00000516937 96 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 RNU6-1271P-201ENST00000517049 105 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.95□□□□□ -1.46
NFKB1P19838 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 PTP4A1P6-201ENST00000531034 478 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.95□□□□□ -1.46
NFKB1P19838 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NFKB1P19838 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 LSM6P2-201ENST00000552208 177 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.95□□□□□ -1.46
NFKB1P19838 MIR5690-201ENST00000583739 73 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.95□□□□□ -1.46
NFKB1P19838 BNIP3P25-201ENST00000596023 559 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.95□□□□□ -1.46
NFKB1P19838 AC022893.3-201ENST00000607665 437 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.95□□□□□ -1.46
NFKB1P19838 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 AP000550.3-201ENST00000637734 379 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
NFKB1P19838 AP004607.3-201ENST00000530354 3915 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 AC027088.4-201ENST00000611559 1947 ntBASIC5.95□□□□□ -1.46
NFKB1P19838 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NFKB1P19838 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NFKB1P19838 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NFKB1P19838 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.94□□□□□ -1.46
NFKB1P19838 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NFKB1P19838 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NFKB1P19838 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NFKB1P19838 Y_RNA.135-201ENST00000363439 95 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 Y_RNA.476-201ENST00000384347 108 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 RNU6-1222P-201ENST00000384615 107 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 MIR558-201ENST00000384920 94 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AL603908.1-201ENST00000406098 201 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 RN7SKP235-201ENST00000410662 305 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 BX284632.2-201ENST00000421091 399 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 RPL31P12-201ENST00000422587 358 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.94□□□□□ -1.46
NFKB1P19838 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.94□□□□□ -1.46
NFKB1P19838 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.94□□□□□ -1.46
NFKB1P19838 TIMM9P1-201ENST00000436122 256 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.94□□□□□ -1.46
NFKB1P19838 AL359955.2-201ENST00000445380 353 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.94□□□□□ -1.46
NFKB1P19838 RPL12P39-201ENST00000455456 496 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 RNU7-182P-201ENST00000459009 62 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 RNU7-180P-201ENST00000459240 63 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 U8.20-201ENST00000459445 131 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 HMGB1P30-201ENST00000492455 606 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AL049874.2-201ENST00000492636 288 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 LSM3P4-201ENST00000502948 309 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.94□□□□□ -1.46
NFKB1P19838 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.94□□□□□ -1.46
NFKB1P19838 RN7SKP24-201ENST00000515888 284 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 RN7SKP99-201ENST00000517028 307 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 HMGB1P19-201ENST00000517578 577 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.94□□□□□ -1.46
NFKB1P19838 WBP1LP3-201ENST00000523033 208 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.94□□□□□ -1.46
NFKB1P19838 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.94□□□□□ -1.46
NFKB1P19838 AC126615.2-201ENST00000553003 515 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AL118558.2-201ENST00000556294 238 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AC091078.2-201ENST00000557145 559 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.94□□□□□ -1.46
NFKB1P19838 AL133481.2-203ENST00000607558 139 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 MIR6793-201ENST00000612376 63 ntBASIC5.94□□□□□ -1.46
NFKB1P19838 MFSD8-239ENST00000641590 2479 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms