Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATF4P18848 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATF4P18848 LINC01355-201ENST00000566551 5444 ntBASIC5.13□□□□□ -1.59
ATF4P18848 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 SNORD1C-201ENST00000363315 78 ntBASIC5.13□□□□□ -1.59
ATF4P18848 RNU1-46P-201ENST00000384425 164 ntBASIC5.13□□□□□ -1.59
ATF4P18848 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ATF4P18848 RNU6-882P-201ENST00000391025 103 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AL359643.1-201ENST00000404109 423 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AL161631.1-201ENST00000417933 486 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.13□□□□□ -1.59
ATF4P18848 Z82198.3-201ENST00000421145 199 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AL589794.1-201ENST00000424971 390 ntBASIC5.13□□□□□ -1.59
ATF4P18848 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
ATF4P18848 OR52B5P-201ENST00000435337 951 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AC090774.1-201ENST00000435925 246 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AC234771.4-201ENST00000441416 730 ntBASIC5.13□□□□□ -1.59
ATF4P18848 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 AC093019.1-201ENST00000443135 252 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AL022237.1-201ENST00000446663 358 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AL445991.1-201ENST00000450381 475 ntBASIC5.13□□□□□ -1.59
ATF4P18848 RPS11P1-201ENST00000451072 473 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATF4P18848 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.13□□□□□ -1.59
ATF4P18848 AC010631.1-201ENST00000474150 156 ntBASIC5.13□□□□□ -1.59
ATF4P18848 RPL39P36-201ENST00000490784 156 ntBASIC5.13□□□□□ -1.59
ATF4P18848 RPL23AP55-201ENST00000498163 452 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 AC131935.1-201ENST00000524621 333 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.13□□□□□ -1.59
ATF4P18848 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.13□□□□□ -1.59
ATF4P18848 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.13□□□□□ -1.59
ATF4P18848 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 AL035410.2-201ENST00000604963 864 ntBASIC5.13□□□□□ -1.59
ATF4P18848 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.13□□□□□ -1.59
ATF4P18848 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ATF4P18848 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.13□□□□□ -1.59
ATF4P18848 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATF4P18848 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 AC004972.1-201ENST00000623934 2209 ntBASIC5.13□□□□□ -1.59
ATF4P18848 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.13□□□□□ -1.59
ATF4P18848 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
ATF4P18848 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATF4P18848 AL137003.2-201ENST00000606924 2538 ntBASIC5.13□□□□□ -1.59
ATF4P18848 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATF4P18848 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 AL034549.2-201ENST00000618285 3373 ntBASIC5.12□□□□□ -1.59
ATF4P18848 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.12□□□□□ -1.59
ATF4P18848 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATF4P18848 RNU6-188P-201ENST00000364207 107 ntBASIC5.12□□□□□ -1.59
ATF4P18848 RNA5SP455-201ENST00000365190 119 ntBASIC5.12□□□□□ -1.59
ATF4P18848 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 RNU6-767P-201ENST00000384132 107 ntBASIC5.12□□□□□ -1.59
ATF4P18848 MT-TD-201ENST00000387419 68 ntBASIC5.12□□□□□ -1.59
ATF4P18848 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATF4P18848 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATF4P18848 AL359634.1-202ENST00000404721 284 ntBASIC5.12□□□□□ -1.59
ATF4P18848 AC119751.6-201ENST00000416712 186 ntBASIC5.12□□□□□ -1.59
ATF4P18848 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.12□□□□□ -1.59
ATF4P18848 AC068533.1-201ENST00000418542 415 ntBASIC5.12□□□□□ -1.59
ATF4P18848 AC244098.2-201ENST00000422068 99 ntBASIC5.12□□□□□ -1.59
ATF4P18848 RIMKLBP2-201ENST00000424737 654 ntBASIC5.12□□□□□ -1.59
ATF4P18848 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.12□□□□□ -1.59
ATF4P18848 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATF4P18848 RPL36AP53-201ENST00000432891 316 ntBASIC5.12□□□□□ -1.59
ATF4P18848 ELOCP23-201ENST00000452014 332 ntBASIC5.12□□□□□ -1.59
ATF4P18848 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.12□□□□□ -1.59
ATF4P18848 AC011476.1-201ENST00000466725 307 ntBASIC5.12□□□□□ -1.59
ATF4P18848 RPL7L1P8-201ENST00000469911 741 ntBASIC5.12□□□□□ -1.59
ATF4P18848 RN7SL518P-201ENST00000491887 280 ntBASIC5.12□□□□□ -1.59
ATF4P18848 SNRPCP11-201ENST00000492453 205 ntBASIC5.12□□□□□ -1.59
ATF4P18848 MTCO2P30-201ENST00000503662 364 ntBASIC5.12□□□□□ -1.59
ATF4P18848 VN1R104P-201ENST00000505115 1009 ntBASIC5.12□□□□□ -1.59
ATF4P18848 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.12□□□□□ -1.59
ATF4P18848 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.12□□□□□ -1.59
ATF4P18848 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 RNU4-29P-201ENST00000515943 174 ntBASIC5.12□□□□□ -1.59
ATF4P18848 RNU6-840P-201ENST00000517275 65 ntBASIC5.12□□□□□ -1.59
ATF4P18848 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
ATF4P18848 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.12□□□□□ -1.59
ATF4P18848 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.12□□□□□ -1.59
ATF4P18848 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.12□□□□□ -1.59
ATF4P18848 BNIP3P6-201ENST00000549284 499 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms