Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN9O95484 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.5□□□□□ -1.85
CLDN9O95484 HSPE1P5-201ENST00000561489 272 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN9O95484 AC079148.1-201ENST00000565944 819 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 CYP2C60P-201ENST00000566088 139 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN9O95484 AC006270.2-201ENST00000578523 652 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 MIR4429-201ENST00000580105 73 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.5□□□□□ -1.85
CLDN9O95484 AL021368.1-201ENST00000607490 540 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AC112503.2-201ENST00000609005 552 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AL356118.1-201ENST00000635272 1078 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN9O95484 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN9O95484 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN9O95484 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLDN9O95484 AC011978.2-201ENST00000569835 2054 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN9O95484 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN9O95484 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN9O95484 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN9O95484 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN9O95484 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN9O95484 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLDN9O95484 MIR16-2-201ENST00000362117 81 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN9O95484 MIR525-201ENST00000384978 85 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 ATP5F1P6-201ENST00000402768 767 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 RHEBP3-201ENST00000411920 351 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 AL158050.1-201ENST00000416077 457 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN9O95484 RPL36AP36-201ENST00000418616 301 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 AC008173.1-201ENST00000418901 264 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN9O95484 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN9O95484 AC092170.1-201ENST00000440211 356 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN9O95484 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN9O95484 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 RPL7P55-201ENST00000450522 746 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN9O95484 RNU7-170P-201ENST00000459303 61 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 RN7SL542P-201ENST00000467147 294 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN9O95484 RPL21P47-201ENST00000483696 477 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 COL6A4P2-205ENST00000509855 506 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 AC021146.1-201ENST00000511202 716 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 RNU2-27P-201ENST00000516185 142 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 SOD1P3-201ENST00000518682 454 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN9O95484 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN9O95484 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 AC017100.2-201ENST00000584628 355 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 AC245389.1-201ENST00000605141 529 ntBASIC3.49□□□□□ -1.85
CLDN9O95484 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.49□□□□□ -1.85
CLDN9O95484 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN9O95484 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN9O95484 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN9O95484 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN9O95484 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN9O95484 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN9O95484 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN9O95484 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN9O95484 RPS4XP5-202ENST00000449995 1334 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN9O95484 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN9O95484 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN9O95484 RNU6-1243P-201ENST00000364028 107 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 SNORD6-201ENST00000365444 73 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 U3.39-201ENST00000408569 239 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN9O95484 SDCBPP2-201ENST00000424643 885 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 OSTCP5-201ENST00000425293 453 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN9O95484 MTCO1P43-201ENST00000431831 488 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 RPL21P110-201ENST00000433345 446 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN9O95484 AC074367.1-201ENST00000438685 1125 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AL138799.3-201ENST00000438968 350 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN9O95484 RPL6P5-201ENST00000445678 828 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN9O95484 BX248409.1-201ENST00000455497 255 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN9O95484 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN9O95484 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN9O95484 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN9O95484 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CLDN9O95484 AP000916.1-201ENST00000533869 835 ntBASIC3.48□□□□□ -1.85
CLDN9O95484 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN9O95484 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN9O95484 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms