Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PTGES3P3-201ENST00000511479 482 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN5O00501 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN5O00501 RNU6-202P-201ENST00000515998 96 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 RNU6-579P-201ENST00000516879 102 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 NARSP2-201ENST00000518524 679 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 AP003049.1-201ENST00000529418 457 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 AC135001.1-201ENST00000544546 283 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN5O00501 AC023824.3-201ENST00000569003 562 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN5O00501 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN5O00501 AC019176.2-201ENST00000611579 315 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 AC015967.1-201ENST00000619893 476 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 AC097372.4-201ENST00000625025 466 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 MIR4496-201ENST00000635896 61 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN5O00501 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN5O00501 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN5O00501 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.72□□□□□ -1.81
CLDN5O00501 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN5O00501 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN5O00501 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN5O00501 AC107081.3-201ENST00000612715 2034 ntBASIC3.71□□□□□ -1.81
CLDN5O00501 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN5O00501 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN5O00501 RNU6-356P-201ENST00000384140 107 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 MIR7-3-201ENST00000384898 110 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 DSTNP4-201ENST00000399472 474 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 ZNF603P-201ENST00000405613 487 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 U3.39-201ENST00000408569 239 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 RN7SKP56-201ENST00000410513 331 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN5O00501 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN5O00501 RPL36P19-201ENST00000430744 301 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AL513175.1-201ENST00000431492 780 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 CKS1BP5-201ENST00000434172 273 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN5O00501 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN5O00501 AC005002.1-201ENST00000447458 540 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AL096803.2-201ENST00000450032 677 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 CYCSP35-201ENST00000451978 304 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 RBMY2UP-201ENST00000453474 324 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN5O00501 RPL7P49-201ENST00000471402 708 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN5O00501 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN5O00501 Vault.1-201ENST00000516474 102 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 CENPUP2-201ENST00000555897 1186 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN5O00501 EIF5A2P1-201ENST00000564027 460 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN5O00501 MIR4504-201ENST00000577413 92 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 RN7SL622P-201ENST00000585292 275 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 YWHAQP7-201ENST00000603536 658 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AC121761.2-201ENST00000617300 689 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN5O00501 AP003355.3-201ENST00000623465 114 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AL356118.1-201ENST00000635272 1078 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CLDN5O00501 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN5O00501 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN5O00501 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN5O00501 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN5O00501 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN5O00501 PNPT1P2-201ENST00000456768 2050 ntBASIC3.71□□□□□ -1.82
CLDN5O00501 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN5O00501 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
CLDN5O00501 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CLDN5O00501 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN5O00501 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN5O00501 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CLDN5O00501 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLDN5O00501 MIR208A-201ENST00000362287 71 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 SNORA63.1-201ENST00000362493 131 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 Y_RNA.110-201ENST00000363220 99 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 RNA5SP50-201ENST00000363731 107 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 OR6K3-202ENST00000368146 996 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN5O00501 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN5O00501 BTBD10P2-201ENST00000404779 676 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 BX664727.1-201ENST00000416024 466 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 AL929288.2-201ENST00000446368 407 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN5O00501 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN5O00501 RPL32P14-201ENST00000463196 378 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 AC008155.2-201ENST00000464337 397 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 RPS4XP10-201ENST00000465034 731 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN5O00501 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN5O00501 RPS3AP50-201ENST00000487064 803 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 RPS27P23-201ENST00000487608 251 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.7□□□□□ -1.82
CLDN5O00501 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN5O00501 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN5O00501 HMGB1P1-201ENST00000522557 636 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN5O00501 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN5O00501 OR8L1P-201ENST00000534005 955 ntBASIC3.7□□□□□ -1.82
CLDN5O00501 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms