Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DRB4X5D2U9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DRB4X5D2U9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms