Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 LETM1P2-201ENST00000597330 2178 ntBASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX49Q9Y6V7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
DDX49Q9Y6V7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
DDX49Q9Y6V7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.28
DDX49Q9Y6V7 AC124283.5-201ENST00000624661 1809 ntBASIC23.08■■□□□ 1.28
DDX49Q9Y6V7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX49Q9Y6V7 AC007613.1-201ENST00000572811 2597 ntBASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
DDX49Q9Y6V7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 AC124016.1-201ENST00000609552 612 ntBASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 AL032819.2-201ENST00000624543 2162 ntBASIC23.06■■□□□ 1.28
DDX49Q9Y6V7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 MIR4497-201ENST00000583208 89 ntBASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX49Q9Y6V7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 AC005082.1-201ENST00000413042 2259 ntBASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX49Q9Y6V7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms