Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 CKBP1-201ENST00000565489 1086 ntBASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.85■□□□□ 0.61
CSNK1G3Q9Y6M4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 KRT8P41-201ENST00000533985 1514 ntBASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 AP005212.1-201ENST00000581547 1997 ntBASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 COX11P1-201ENST00000489116 835 ntBASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 AL031432.5-201ENST00000641059 760 ntBASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1G3Q9Y6M4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CSNK1G3Q9Y6M4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSNK1G3Q9Y6M4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 AC139887.4-201ENST00000607877 719 ntBASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 AC141257.4-201ENST00000634557 245 ntBASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 AC136944.6-201ENST00000634818 245 ntBASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 GABARAPL3-202ENST00000624044 1851 ntBASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.83■□□□□ 0.6
CSNK1G3Q9Y6M4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 AL391422.3-201ENST00000603791 2761 ntBASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 TSPY5P-201ENST00000426936 936 ntBASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 YBX1P2-201ENST00000489612 999 ntBASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1G3Q9Y6M4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1G3Q9Y6M4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1G3Q9Y6M4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CSNK1G3Q9Y6M4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1G3Q9Y6M4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1G3Q9Y6M4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1G3Q9Y6M4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.81■□□□□ 0.6
CSNK1G3Q9Y6M4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.81■□□□□ 0.6
CSNK1G3Q9Y6M4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms