Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
CLIC4Q9Y696 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22■■□□□ 1.11
CLIC4Q9Y696 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22■■□□□ 1.11
CLIC4Q9Y696 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22■■□□□ 1.11
CLIC4Q9Y696 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22■■□□□ 1.11
CLIC4Q9Y696 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CLIC4Q9Y696 AC120498.9-201ENST00000339021 3867 ntBASIC22■■□□□ 1.11
CLIC4Q9Y696 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 MTDHP1-201ENST00000605323 784 ntBASIC21.99■■□□□ 1.11
CLIC4Q9Y696 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC4Q9Y696 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 NBPF21P-201ENST00000425093 1451 ntBASIC21.98■■□□□ 1.11
CLIC4Q9Y696 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.98■■□□□ 1.11
CLIC4Q9Y696 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 AC026366.1-201ENST00000488803 879 ntBASIC21.97■■□□□ 1.11
CLIC4Q9Y696 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 AC069544.1-201ENST00000609399 999 ntBASIC21.97■■□□□ 1.11
CLIC4Q9Y696 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CLIC4Q9Y696 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 PRKY-204ENST00000533551 1019 ntBASIC21.96■■□□□ 1.11
CLIC4Q9Y696 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.96■■□□□ 1.11
CLIC4Q9Y696 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CLIC4Q9Y696 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.95■■□□□ 1.1
CLIC4Q9Y696 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.95■■□□□ 1.1
CLIC4Q9Y696 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC4Q9Y696 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.95■■□□□ 1.1
CLIC4Q9Y696 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.95■■□□□ 1.1
CLIC4Q9Y696 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.95■■□□□ 1.1
CLIC4Q9Y696 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
CLIC4Q9Y696 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms