Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 AC106730.1-201ENST00000566722 1090 ntBASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 AC244015.2-201ENST00000616358 1861 ntBASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 REXO1L6P-202ENST00000619970 1078 ntBASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 AC055717.3-201ENST00000622967 595 ntBASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 DPP3P2-201ENST00000416030 1696 ntBASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL17A1Q9UMD9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 MIR662-201ENST00000384847 95 ntBASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 AC079834.2-201ENST00000609776 1949 ntBASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC29.23■■■□□ 2.27
COL17A1Q9UMD9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 PMS2P2-201ENST00000425039 1128 ntBASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 SAPCD2P3-201ENST00000455031 850 ntBASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 AC243591.1-201ENST00000452967 1364 ntBASIC29.22■■■□□ 2.27
COL17A1Q9UMD9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 AC027796.2-201ENST00000575326 344 ntBASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC29.21■■■□□ 2.27
COL17A1Q9UMD9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL17A1Q9UMD9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC29.2■■■□□ 2.27
COL17A1Q9UMD9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
COL17A1Q9UMD9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
COL17A1Q9UMD9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.27
COL17A1Q9UMD9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL17A1Q9UMD9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL17A1Q9UMD9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL17A1Q9UMD9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC29.2■■■□□ 2.26
COL17A1Q9UMD9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
COL17A1Q9UMD9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC29.2■■■□□ 2.26
COL17A1Q9UMD9 AC121338.2-201ENST00000622535 1744 ntBASIC29.2■■■□□ 2.26
COL17A1Q9UMD9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
COL17A1Q9UMD9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 AL773604.1-201ENST00000617417 272 ntBASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL17A1Q9UMD9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC29.18■■■□□ 2.26
COL17A1Q9UMD9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC29.18■■■□□ 2.26
COL17A1Q9UMD9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms