Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 AC011506.1-201ENST00000474329 610 ntBASIC19.16■□□□□ 0.66
SPASTQ9UBP0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 C2orf69P3-201ENST00000565542 1120 ntBASIC19.16■□□□□ 0.66
SPASTQ9UBP0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 AP005242.2-201ENST00000580065 1175 ntBASIC19.16■□□□□ 0.66
SPASTQ9UBP0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SPASTQ9UBP0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 TMEM179-206ENST00000616017 1645 ntBASIC19.15■□□□□ 0.66
SPASTQ9UBP0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 AC113347.1-201ENST00000413321 391 ntBASIC19.15■□□□□ 0.66
SPASTQ9UBP0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPASTQ9UBP0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.14■□□□□ 0.66
SPASTQ9UBP0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPASTQ9UBP0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPASTQ9UBP0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
SPASTQ9UBP0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 AC005521.1-201ENST00000393351 872 ntBASIC19.14■□□□□ 0.65
SPASTQ9UBP0 AC097488.1-201ENST00000507834 756 ntBASIC19.14■□□□□ 0.65
SPASTQ9UBP0 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 HLA-A-209ENST00000638375 975 ntBASIC19.14■□□□□ 0.65
SPASTQ9UBP0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPASTQ9UBP0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 CRYGFP-201ENST00000418459 633 ntBASIC19.13■□□□□ 0.65
SPASTQ9UBP0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 AL137013.1-201ENST00000432946 1228 ntBASIC19.13■□□□□ 0.65
SPASTQ9UBP0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPASTQ9UBP0 AP001271.2-201ENST00000624018 1556 ntBASIC19.13■□□□□ 0.65
SPASTQ9UBP0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms