Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 MMP23A-201ENST00000234610 1017 ntBASIC17.85■□□□□ 0.45
HPF1Q9NWY4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HPF1Q9NWY4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 AC211429.1-201ENST00000415277 523 ntBASIC17.84■□□□□ 0.45
HPF1Q9NWY4 AC087499.1-201ENST00000418141 1075 ntBASIC17.84■□□□□ 0.45
HPF1Q9NWY4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 LINC01023-201ENST00000606054 436 ntBASIC17.84■□□□□ 0.45
HPF1Q9NWY4 AP000525.1-201ENST00000608286 694 ntBASIC17.84■□□□□ 0.45
HPF1Q9NWY4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPF1Q9NWY4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPF1Q9NWY4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 B3GAT3P1-201ENST00000471720 806 ntBASIC17.83■□□□□ 0.44
HPF1Q9NWY4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.83■□□□□ 0.44
HPF1Q9NWY4 AC133561.5-201ENST00000635547 218 ntBASIC17.83■□□□□ 0.44
HPF1Q9NWY4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HPF1Q9NWY4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms