Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 AP006587.1-201ENST00000534129 1502 ntBASIC19.87■□□□□ 0.77
VPS45Q9NRW7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 AL390955.1-201ENST00000428694 934 ntBASIC19.87■□□□□ 0.77
VPS45Q9NRW7 AC116562.2-201ENST00000507042 360 ntBASIC19.87■□□□□ 0.77
VPS45Q9NRW7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS45Q9NRW7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 YBX1P10-201ENST00000444752 975 ntBASIC19.86■□□□□ 0.77
VPS45Q9NRW7 AC104076.2-201ENST00000448912 469 ntBASIC19.86■□□□□ 0.77
VPS45Q9NRW7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
VPS45Q9NRW7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VPS45Q9NRW7 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.84■□□□□ 0.77
VPS45Q9NRW7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 KSR1P1-201ENST00000446298 240 ntBASIC19.84■□□□□ 0.77
VPS45Q9NRW7 CR392000.1-201ENST00000624770 1228 ntBASIC19.84■□□□□ 0.77
VPS45Q9NRW7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.84■□□□□ 0.77
VPS45Q9NRW7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS45Q9NRW7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms