Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 AC006333.2-201ENST00000607957 2099 ntBASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUCKS1Q9H1E3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.86■□□□□ 0.93
NUCKS1Q9H1E3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 FAM201B-201ENST00000458407 597 ntBASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 AP003097.1-201ENST00000530657 1135 ntBASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUCKS1Q9H1E3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 AC124283.5-201ENST00000624661 1809 ntBASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 AC008403.3-201ENST00000598924 454 ntBASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 AL049812.1-201ENST00000432563 2267 ntBASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUCKS1Q9H1E3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 AC026366.1-201ENST00000488803 879 ntBASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 SOX15-203ENST00000570788 1093 ntBASIC20.83■□□□□ 0.93
NUCKS1Q9H1E3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NUCKS1Q9H1E3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms