Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLPBQ9H078 FAM210CP-201ENST00000445714 574 ntBASIC19.37■□□□□ 0.69
CLPBQ9H078 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLPBQ9H078 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
CLPBQ9H078 AC012306.2-201ENST00000609350 630 ntBASIC19.37■□□□□ 0.69
CLPBQ9H078 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.37■□□□□ 0.69
CLPBQ9H078 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLPBQ9H078 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLPBQ9H078 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPBQ9H078 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPBQ9H078 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLPBQ9H078 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPBQ9H078 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLPBQ9H078 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPBQ9H078 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.37■□□□□ 0.69
CLPBQ9H078 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLPBQ9H078 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLPBQ9H078 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLPBQ9H078 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.36■□□□□ 0.69
CLPBQ9H078 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.36■□□□□ 0.69
CLPBQ9H078 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 NUDT16P1-203ENST00000513809 620 ntBASIC19.36■□□□□ 0.69
CLPBQ9H078 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLPBQ9H078 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPBQ9H078 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.35■□□□□ 0.69
CLPBQ9H078 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CLPBQ9H078 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
CLPBQ9H078 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLPBQ9H078 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.35■□□□□ 0.69
CLPBQ9H078 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.35■□□□□ 0.69
CLPBQ9H078 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.35■□□□□ 0.69
CLPBQ9H078 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CLPBQ9H078 REXO1L10P-201ENST00000615707 1290 ntBASIC19.35■□□□□ 0.69
CLPBQ9H078 AC097493.4-201ENST00000641197 219 ntBASIC19.35■□□□□ 0.69
CLPBQ9H078 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.35■□□□□ 0.69
CLPBQ9H078 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.35■□□□□ 0.69
CLPBQ9H078 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.35■□□□□ 0.69
CLPBQ9H078 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLPBQ9H078 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CLPBQ9H078 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLPBQ9H078 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.35■□□□□ 0.69
CLPBQ9H078 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CLPBQ9H078 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.35■□□□□ 0.69
CLPBQ9H078 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPBQ9H078 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.34■□□□□ 0.69
CLPBQ9H078 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPBQ9H078 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPBQ9H078 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CLPBQ9H078 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPBQ9H078 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPBQ9H078 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLPBQ9H078 NIFKP9-201ENST00000419265 221 ntBASIC19.34■□□□□ 0.69
CLPBQ9H078 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.34■□□□□ 0.69
CLPBQ9H078 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.34■□□□□ 0.69
CLPBQ9H078 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.34■□□□□ 0.69
CLPBQ9H078 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLPBQ9H078 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.34■□□□□ 0.69
CLPBQ9H078 CR392000.1-201ENST00000624770 1228 ntBASIC19.34■□□□□ 0.69
CLPBQ9H078 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.34■□□□□ 0.69
CLPBQ9H078 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLPBQ9H078 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.34■□□□□ 0.69
CLPBQ9H078 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.33■□□□□ 0.69
CLPBQ9H078 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.33■□□□□ 0.69
CLPBQ9H078 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLPBQ9H078 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.33■□□□□ 0.69
CLPBQ9H078 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLPBQ9H078 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.33■□□□□ 0.69
CLPBQ9H078 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLPBQ9H078 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.33■□□□□ 0.69
CLPBQ9H078 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CLPBQ9H078 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPBQ9H078 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.33■□□□□ 0.68
CLPBQ9H078 KSR1P1-201ENST00000446298 240 ntBASIC19.33■□□□□ 0.68
CLPBQ9H078 RBM17P1-201ENST00000453646 1190 ntBASIC19.33■□□□□ 0.68
CLPBQ9H078 KRT18P21-201ENST00000515767 1272 ntBASIC19.33■□□□□ 0.68
CLPBQ9H078 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPBQ9H078 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.33■□□□□ 0.68
CLPBQ9H078 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLPBQ9H078 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.33■□□□□ 0.68
CLPBQ9H078 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms