Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FP475955.4-201ENST00000623131 1990 ntBASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HDHD3Q9BSH5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 MIR663A-201ENST00000385250 93 ntBASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HDHD3Q9BSH5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 CDCA4P2-201ENST00000441182 718 ntBASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 AC104417.2-201ENST00000562989 1793 ntBASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HDHD3Q9BSH5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 RPS2P52-201ENST00000469610 820 ntBASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDHD3Q9BSH5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms