Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NECTIN4Q96NY8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 KRT17P6-201ENST00000453795 1220 ntBASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 BX276092.5-203ENST00000456199 560 ntBASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 RASA4DP-201ENST00000460726 1199 ntBASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NECTIN4Q96NY8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NECTIN4Q96NY8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 AL845331.1-201ENST00000424978 1190 ntBASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 AC011498.5-201ENST00000592027 486 ntBASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 CR769767.2-201ENST00000622735 460 ntBASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 FEM1AP1-201ENST00000431297 1995 ntBASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
NECTIN4Q96NY8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 KRT8P10-201ENST00000450021 1447 ntBASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NECTIN4Q96NY8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NECTIN4Q96NY8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms