Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 SNORA78-201ENST00000459373 127 ntBASIC19.62■□□□□ 0.73
CCDC97Q96F63 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC97Q96F63 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC97Q96F63 PHGDH-210ENST00000641115 1638 ntBASIC19.62■□□□□ 0.73
CCDC97Q96F63 KRT17P2-201ENST00000300992 1314 ntBASIC19.61■□□□□ 0.73
CCDC97Q96F63 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC97Q96F63 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC97Q96F63 AC211429.1-201ENST00000415277 523 ntBASIC19.61■□□□□ 0.73
CCDC97Q96F63 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC97Q96F63 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC97Q96F63 Z99916.2-201ENST00000604037 246 ntBASIC19.61■□□□□ 0.73
CCDC97Q96F63 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC97Q96F63 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC97Q96F63 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC97Q96F63 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC97Q96F63 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC97Q96F63 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC97Q96F63 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 AC018553.1-201ENST00000616682 1458 ntBASIC19.6■□□□□ 0.73
CCDC97Q96F63 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC97Q96F63 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC97Q96F63 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC97Q96F63 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC97Q96F63 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC97Q96F63 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC97Q96F63 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC97Q96F63 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms