Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 CHCHD2P8-201ENST00000429873 447 ntBASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 AC091304.2-201ENST00000564639 760 ntBASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM43Q96BQ3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 SLC25A6P4-201ENST00000586535 553 ntBASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 AC079602.3-201ENST00000623931 403 ntBASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 AL117328.2-201ENST00000624617 1940 ntBASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM43Q96BQ3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 AC079776.4-201ENST00000511039 504 ntBASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 AC106795.1-205ENST00000512851 1056 ntBASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 AP002469.2-201ENST00000531724 424 ntBASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM43Q96BQ3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 FOSL1P1-201ENST00000511041 816 ntBASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 TPSP2-201ENST00000561760 610 ntBASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 AL121772.3-201ENST00000610840 674 ntBASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 AC093525.10-201ENST00000625130 1569 ntBASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM43Q96BQ3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms