Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 KRT16P1-201ENST00000399124 1418 ntBASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 AC007952.6-201ENST00000573168 2673 ntBASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 AC003957.1-201ENST00000625108 2673 ntBASIC19.08■□□□□ 0.64
SH3KBP1Q96B97 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 NUDT16P1-203ENST00000513809 620 ntBASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 AL355075.4-201ENST00000554988 638 ntBASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.07■□□□□ 0.64
SH3KBP1Q96B97 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 LINC01023-201ENST00000606054 436 ntBASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CR392000.1-201ENST00000624770 1228 ntBASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SH3KBP1Q96B97 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 AC125437.2-201ENST00000625180 2167 ntBASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SH3KBP1Q96B97 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SH3KBP1Q96B97 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms