Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS33AQ96AX1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 AC004911.1-201ENST00000416316 871 ntBASIC18.5■□□□□ 0.55
VPS33AQ96AX1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
VPS33AQ96AX1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS33AQ96AX1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
VPS33AQ96AX1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 BCL2-203ENST00000589955 5011 ntBASIC18.47■□□□□ 0.55
VPS33AQ96AX1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms