Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 AL160286.2-201ENST00000567150 934 ntBASIC18.53■□□□□ 0.56
UBE2E3Q969T4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 AC120498.9-201ENST00000339021 3867 ntBASIC18.52■□□□□ 0.56
UBE2E3Q969T4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 C1QBPP2-201ENST00000528754 825 ntBASIC18.52■□□□□ 0.56
UBE2E3Q969T4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 HLA-A-209ENST00000638375 975 ntBASIC18.52■□□□□ 0.56
UBE2E3Q969T4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE2E3Q969T4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2E3Q969T4 SDHAP1-207ENST00000440850 2000 ntBASIC18.52■□□□□ 0.55
UBE2E3Q969T4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2E3Q969T4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2E3Q969T4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2E3Q969T4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.52■□□□□ 0.55
UBE2E3Q969T4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2E3Q969T4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.51■□□□□ 0.55
UBE2E3Q969T4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBE2E3Q969T4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 KRT18P29-201ENST00000397031 1267 ntBASIC18.5■□□□□ 0.55
UBE2E3Q969T4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 ITM2C-210ENST00000620962 501 ntBASIC18.5■□□□□ 0.55
UBE2E3Q969T4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2E3Q969T4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms