Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
SMARCC1Q92922 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.67■■□□□ 1.54
SMARCC1Q92922 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.67■■□□□ 1.54
SMARCC1Q92922 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
SMARCC1Q92922 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC24.66■■□□□ 1.54
SMARCC1Q92922 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SMARCC1Q92922 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC24.66■■□□□ 1.54
SMARCC1Q92922 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 AC111152.3-201ENST00000569699 673 ntBASIC24.66■■□□□ 1.54
SMARCC1Q92922 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC24.66■■□□□ 1.54
SMARCC1Q92922 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 AL121672.3-201ENST00000608644 468 ntBASIC24.66■■□□□ 1.54
SMARCC1Q92922 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.66■■□□□ 1.54
SMARCC1Q92922 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SMARCC1Q92922 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
SMARCC1Q92922 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMARCC1Q92922 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 AC011498.5-201ENST00000592027 486 ntBASIC24.65■■□□□ 1.54
SMARCC1Q92922 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMARCC1Q92922 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
SMARCC1Q92922 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC1Q92922 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC1Q92922 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC1Q92922 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC1Q92922 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC1Q92922 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 FDX1P1-201ENST00000449115 551 ntBASIC24.64■■□□□ 1.54
SMARCC1Q92922 BX276092.5-203ENST00000456199 560 ntBASIC24.64■■□□□ 1.54
SMARCC1Q92922 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMARCC1Q92922 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.64■■□□□ 1.54
SMARCC1Q92922 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC24.64■■□□□ 1.53
SMARCC1Q92922 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SMARCC1Q92922 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
SMARCC1Q92922 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SMARCC1Q92922 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
SMARCC1Q92922 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 AC004870.1-201ENST00000315132 882 ntBASIC24.63■■□□□ 1.53
SMARCC1Q92922 MIR3180-1-201ENST00000580374 94 ntBASIC24.63■■□□□ 1.53
SMARCC1Q92922 MIR3180-3-201ENST00000584616 94 ntBASIC24.63■■□□□ 1.53
SMARCC1Q92922 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.63■■□□□ 1.53
SMARCC1Q92922 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC24.63■■□□□ 1.53
SMARCC1Q92922 AC016734.2-201ENST00000624325 1377 ntBASIC24.63■■□□□ 1.53
SMARCC1Q92922 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
SMARCC1Q92922 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.63■■□□□ 1.53
SMARCC1Q92922 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SMARCC1Q92922 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMARCC1Q92922 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SMARCC1Q92922 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC1Q92922 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC1Q92922 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.62■■□□□ 1.53
SMARCC1Q92922 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC1Q92922 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC1Q92922 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SMARCC1Q92922 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SMARCC1Q92922 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC24.62■■□□□ 1.53
SMARCC1Q92922 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC1Q92922 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC1Q92922 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC1Q92922 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMARCC1Q92922 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SMARCC1Q92922 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SMARCC1Q92922 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC1Q92922 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMARCC1Q92922 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.61■■□□□ 1.53
SMARCC1Q92922 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms