Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 AC026271.3-201ENST00000571884 352 ntBASIC20.24■□□□□ 0.83
RNF139Q8WU17 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.24■□□□□ 0.83
RNF139Q8WU17 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF139Q8WU17 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RNF139Q8WU17 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF139Q8WU17 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF139Q8WU17 AL160286.2-201ENST00000567150 934 ntBASIC20.23■□□□□ 0.83
RNF139Q8WU17 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RNF139Q8WU17 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF139Q8WU17 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF139Q8WU17 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.22■□□□□ 0.83
RNF139Q8WU17 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 FSCN1P1-201ENST00000568912 1481 ntBASIC20.22■□□□□ 0.83
RNF139Q8WU17 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF139Q8WU17 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF139Q8WU17 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 REXO1L10P-201ENST00000615707 1290 ntBASIC20.21■□□□□ 0.83
RNF139Q8WU17 REXO1L12P-201ENST00000622156 912 ntBASIC20.21■□□□□ 0.83
RNF139Q8WU17 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF139Q8WU17 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF139Q8WU17 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
RNF139Q8WU17 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.2■□□□□ 0.83
RNF139Q8WU17 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.83
RNF139Q8WU17 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF139Q8WU17 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF139Q8WU17 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF139Q8WU17 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF139Q8WU17 LINC01465-201ENST00000408887 1940 ntBASIC20.2■□□□□ 0.82
RNF139Q8WU17 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 AC116562.2-201ENST00000507042 360 ntBASIC20.2■□□□□ 0.82
RNF139Q8WU17 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 AL355075.4-201ENST00000554988 638 ntBASIC20.2■□□□□ 0.82
RNF139Q8WU17 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms