Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 AC133552.2-202ENST00000575694 574 ntBASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 FEM1AP3-201ENST00000403722 1741 ntBASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 KRT8P8-201ENST00000434750 1448 ntBASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 LSM12P1-201ENST00000411836 588 ntBASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 AC006970.2-201ENST00000450065 779 ntBASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RPS4Y2Q8TD47 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RPS4Y2Q8TD47 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 NOC2LP1-202ENST00000452600 2235 ntBASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 YBX1P10-201ENST00000444752 975 ntBASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 AC005181.1-201ENST00000604782 1256 ntBASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 RAP2CP1-201ENST00000605103 478 ntBASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 AC083906.6-201ENST00000641366 219 ntBASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms