Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 AC141586.3-201ENST00000562166 1838 ntBASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 AC020916.1-201ENST00000587762 1774 ntBASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCHCR1Q8TD31 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 TFP1-202ENST00000475455 1573 ntBASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 UNC93B5-201ENST00000530315 699 ntBASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCHCR1Q8TD31 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCHCR1Q8TD31 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCHCR1Q8TD31 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms