Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 AL512408.1-201ENST00000569378 2000 ntBASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.24■□□□□ 0.83
SHKBP1Q8TBC3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SHKBP1Q8TBC3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 BX664615.1-201ENST00000443558 458 ntBASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 CCR12P-201ENST00000446203 998 ntBASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHKBP1Q8TBC3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 AL691432.2-201ENST00000607222 2038 ntBASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 AC007663.1-201ENST00000438948 1240 ntBASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 PKD1P6-201ENST00000343738 4769 ntBASIC20.21■□□□□ 0.83
SHKBP1Q8TBC3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
SHKBP1Q8TBC3 AC092338.2-201ENST00000568827 1415 ntBASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 AK4P3-201ENST00000418260 669 ntBASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 AC087388.1-201ENST00000571370 1112 ntBASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 AL023803.3-201ENST00000615559 522 ntBASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 AL138966.2-201ENST00000621997 464 ntBASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SHKBP1Q8TBC3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 AC117947.1-201ENST00000427448 529 ntBASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.19■□□□□ 0.82
SHKBP1Q8TBC3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms