Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 RPS2P4-201ENST00000476944 856 ntBASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 AC110285.5-201ENST00000611501 352 ntBASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 FAM197Y4-202ENST00000622692 608 ntBASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 RPPH1-201ENST00000516869 333 ntBASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH19Q8TAB3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDH19Q8TAB3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 UBE2SP1-201ENST00000450587 669 ntBASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH19Q8TAB3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms