Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 RN7SL510P-201ENST00000581311 263 ntBASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC44A3Q8N4M1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 AC092329.2-201ENST00000598402 547 ntBASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC44A3Q8N4M1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 FDX1P1-201ENST00000449115 551 ntBASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 PRELID1P1-202ENST00000567272 903 ntBASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC44A3Q8N4M1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 AL645929.1-201ENST00000420084 975 ntBASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLC44A3Q8N4M1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 MIR4674-201ENST00000582457 87 ntBASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SLC44A3Q8N4M1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 AL845331.1-201ENST00000424978 1190 ntBASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 AC092597.1-201ENST00000487352 616 ntBASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A3Q8N4M1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms