Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC26.76■■□□□ 1.87
ARHGEF28Q8N1W1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC26.76■■□□□ 1.87
ARHGEF28Q8N1W1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
ARHGEF28Q8N1W1 HOMER2P1-201ENST00000455653 964 ntBASIC26.76■■□□□ 1.87
ARHGEF28Q8N1W1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC26.76■■□□□ 1.87
ARHGEF28Q8N1W1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
ARHGEF28Q8N1W1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ARHGEF28Q8N1W1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 GPAT2P1-201ENST00000444924 1672 ntBASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ARHGEF28Q8N1W1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 PCED1CP-201ENST00000419887 785 ntBASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 AC091076.1-201ENST00000610741 619 ntBASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
ARHGEF28Q8N1W1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 AC069148.1-201ENST00000608741 768 ntBASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 HYMAI.1-201ENST00000620949 238 ntBASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC26.73■■□□□ 1.87
ARHGEF28Q8N1W1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ARHGEF28Q8N1W1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ARHGEF28Q8N1W1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 GCSHP2-201ENST00000560971 527 ntBASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ARHGEF28Q8N1W1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms