Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 SLC25A1P4-201ENST00000567977 778 ntBASIC17.87■□□□□ 0.45
BEST3Q8N1M1 RN7SL850P-201ENST00000579959 291 ntBASIC17.87■□□□□ 0.45
BEST3Q8N1M1 AP005242.2-201ENST00000580065 1175 ntBASIC17.87■□□□□ 0.45
BEST3Q8N1M1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 KRT18P22-201ENST00000402024 1347 ntBASIC17.87■□□□□ 0.45
BEST3Q8N1M1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 AC099778.1-201ENST00000568593 1911 ntBASIC17.86■□□□□ 0.45
BEST3Q8N1M1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 TMPOP1-202ENST00000424642 1267 ntBASIC17.86■□□□□ 0.45
BEST3Q8N1M1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 AC008040.2-201ENST00000461049 708 ntBASIC17.86■□□□□ 0.45
BEST3Q8N1M1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.86■□□□□ 0.45
BEST3Q8N1M1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 AP000692.2-201ENST00000608391 879 ntBASIC17.86■□□□□ 0.45
BEST3Q8N1M1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BEST3Q8N1M1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 FAM207BP-201ENST00000447172 505 ntBASIC17.85■□□□□ 0.45
BEST3Q8N1M1 Z85996.1-201ENST00000494644 937 ntBASIC17.85■□□□□ 0.45
BEST3Q8N1M1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST3Q8N1M1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 LINC01465-201ENST00000408887 1940 ntBASIC17.84■□□□□ 0.45
BEST3Q8N1M1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST3Q8N1M1 AC005521.1-201ENST00000393351 872 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms