Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LINC01465-201ENST00000408887 1940 ntBASIC19.72■□□□□ 0.75
SIX5Q8N196 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX5Q8N196 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SIX5Q8N196 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.71■□□□□ 0.75
SIX5Q8N196 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SIX5Q8N196 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.71■□□□□ 0.75
SIX5Q8N196 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.71■□□□□ 0.75
SIX5Q8N196 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.71■□□□□ 0.75
SIX5Q8N196 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.71■□□□□ 0.75
SIX5Q8N196 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.71■□□□□ 0.75
SIX5Q8N196 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SIX5Q8N196 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.71■□□□□ 0.75
SIX5Q8N196 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.71■□□□□ 0.75
SIX5Q8N196 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SIX5Q8N196 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX5Q8N196 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SIX5Q8N196 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.7■□□□□ 0.74
SIX5Q8N196 KRT8P10-201ENST00000450021 1447 ntBASIC19.7■□□□□ 0.74
SIX5Q8N196 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.7■□□□□ 0.74
SIX5Q8N196 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.7■□□□□ 0.74
SIX5Q8N196 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.7■□□□□ 0.74
SIX5Q8N196 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.7■□□□□ 0.74
SIX5Q8N196 CR769767.2-201ENST00000622735 460 ntBASIC19.7■□□□□ 0.74
SIX5Q8N196 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.7■□□□□ 0.74
SIX5Q8N196 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SIX5Q8N196 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SIX5Q8N196 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.7■□□□□ 0.74
SIX5Q8N196 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.7■□□□□ 0.74
SIX5Q8N196 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SIX5Q8N196 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX5Q8N196 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.7■□□□□ 0.74
SIX5Q8N196 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
SIX5Q8N196 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.69■□□□□ 0.74
SIX5Q8N196 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.69■□□□□ 0.74
SIX5Q8N196 SPDYE13P-201ENST00000445314 798 ntBASIC19.69■□□□□ 0.74
SIX5Q8N196 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.69■□□□□ 0.74
SIX5Q8N196 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.69■□□□□ 0.74
SIX5Q8N196 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.69■□□□□ 0.74
SIX5Q8N196 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 GPALPP1-207ENST00000611650 899 ntBASIC19.69■□□□□ 0.74
SIX5Q8N196 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SIX5Q8N196 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.69■□□□□ 0.74
SIX5Q8N196 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX5Q8N196 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SIX5Q8N196 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SIX5Q8N196 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.68■□□□□ 0.74
SIX5Q8N196 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.68■□□□□ 0.74
SIX5Q8N196 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SIX5Q8N196 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 AL645929.1-201ENST00000420084 975 ntBASIC19.68■□□□□ 0.74
SIX5Q8N196 KRT17P6-201ENST00000453795 1220 ntBASIC19.68■□□□□ 0.74
SIX5Q8N196 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.68■□□□□ 0.74
SIX5Q8N196 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.68■□□□□ 0.74
SIX5Q8N196 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX5Q8N196 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.68■□□□□ 0.74
SIX5Q8N196 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms