Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 KRT18P22-201ENST00000402024 1347 ntBASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 AC005363.2-201ENST00000618631 242 ntBASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 KRT8P41-201ENST00000533985 1514 ntBASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN4BQ8IWT1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.33■□□□□ 0.84
SCN4BQ8IWT1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCN4BQ8IWT1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCN4BQ8IWT1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 ZNF815P-204ENST00000434898 1737 ntBASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN4BQ8IWT1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 RCN1P1-201ENST00000400413 996 ntBASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 AC104417.2-201ENST00000562989 1793 ntBASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN4BQ8IWT1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 EGLN1P1-201ENST00000531623 762 ntBASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 AC096733.2-201ENST00000609937 1394 ntBASIC20.3■□□□□ 0.84
SCN4BQ8IWT1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms