Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.13■□□□□ 0.33
LRRC28Q86X40 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 AC087633.2-202ENST00000565166 1439 ntBASIC17.12■□□□□ 0.33
LRRC28Q86X40 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRRC28Q86X40 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC28Q86X40 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 AC083880.1-201ENST00000608266 535 ntBASIC17.11■□□□□ 0.33
LRRC28Q86X40 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC28Q86X40 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC28Q86X40 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC28Q86X40 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 LTB4R2-202ENST00000528054 3092 ntBASIC17.1■□□□□ 0.33
LRRC28Q86X40 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC28Q86X40 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC28Q86X40 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.1■□□□□ 0.33
LRRC28Q86X40 AC105020.6-201ENST00000621523 1217 ntBASIC17.1■□□□□ 0.33
LRRC28Q86X40 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRRC28Q86X40 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC28Q86X40 AP001271.2-201ENST00000624018 1556 ntBASIC17.1■□□□□ 0.33
LRRC28Q86X40 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC28Q86X40 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms