Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 AL031432.5-201ENST00000641059 760 ntBASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 SLC25A6P4-201ENST00000586535 553 ntBASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 BX119927.1-201ENST00000636596 1552 ntBASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 AP002414.4-201ENST00000589764 1148 ntBASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 TBC1D3P2-202ENST00000577902 1649 ntBASIC11.91□□□□□ -0.5
VPS13BQ7Z7G8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 AL645929.1-201ENST00000420084 975 ntBASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 MIR4674-201ENST00000582457 87 ntBASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
VPS13BQ7Z7G8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC11.9□□□□□ -0.51
VPS13BQ7Z7G8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 AC112907.2-201ENST00000448639 330 ntBASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 KRT18P1-202ENST00000452408 1331 ntBASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms