Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 AC083906.2-201ENST00000511578 360 ntBASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.43
MRPL55Q7Z7F7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.4□□□□□ -0.43
MRPL55Q7Z7F7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
MRPL55Q7Z7F7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
MRPL55Q7Z7F7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 AP000974.1-201ENST00000623909 2387 ntBASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 AC092118.2-201ENST00000613495 667 ntBASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 TFP1-202ENST00000475455 1573 ntBASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MRPL55Q7Z7F7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 MIR4758-201ENST00000577688 71 ntBASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
MRPL55Q7Z7F7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms