Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 AC142086.2-201ENST00000569753 217 ntBASIC16.74■□□□□ 0.27
C11orf88Q6PI97 AC010536.3-201ENST00000620306 533 ntBASIC16.74■□□□□ 0.27
C11orf88Q6PI97 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 AC083906.2-201ENST00000511578 360 ntBASIC16.73■□□□□ 0.27
C11orf88Q6PI97 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 AC133552.2-202ENST00000575694 574 ntBASIC16.73■□□□□ 0.27
C11orf88Q6PI97 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.73■□□□□ 0.27
C11orf88Q6PI97 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 AC079598.2-202ENST00000546624 1451 ntBASIC16.73■□□□□ 0.27
C11orf88Q6PI97 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
C11orf88Q6PI97 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 AC061975.6-201ENST00000579045 1553 ntBASIC16.72■□□□□ 0.27
C11orf88Q6PI97 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 TSPY6P-201ENST00000448518 926 ntBASIC16.72■□□□□ 0.27
C11orf88Q6PI97 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.72■□□□□ 0.27
C11orf88Q6PI97 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms