Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRIP1LQ68CZ1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRIP1LQ68CZ1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRIP1LQ68CZ1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC27.33■■□□□ 1.97
RPGRIP1LQ68CZ1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRIP1LQ68CZ1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRIP1LQ68CZ1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 SPDYE13P-201ENST00000445314 798 ntBASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 AC069148.1-201ENST00000608741 768 ntBASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRIP1LQ68CZ1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 LINC01311-201ENST00000565162 1445 ntBASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRIP1LQ68CZ1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
RPGRIP1LQ68CZ1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 FXN-203ENST00000396366 922 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 DUSP5P1-201ENST00000441325 1139 ntBASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 FGF14-AS2-201ENST00000606448 1074 ntBASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRIP1LQ68CZ1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 AC093458.2-201ENST00000623150 629 ntBASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC27.28■■□□□ 1.96
RPGRIP1LQ68CZ1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RPGRIP1LQ68CZ1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms