Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 AC005225.4-201ENST00000557330 545 ntBASIC10.32□□□□□ -0.76
RNF213Q63HN8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 AC093028.1-201ENST00000622998 982 ntBASIC10.32□□□□□ -0.76
RNF213Q63HN8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 AC005332.3-201ENST00000589904 676 ntBASIC10.31□□□□□ -0.76
RNF213Q63HN8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC10.31□□□□□ -0.76
RNF213Q63HN8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 SIGLEC30P-201ENST00000455569 941 ntBASIC10.31□□□□□ -0.76
RNF213Q63HN8 YBX1P5-201ENST00000509441 847 ntBASIC10.31□□□□□ -0.76
RNF213Q63HN8 AC074051.2-201ENST00000565115 352 ntBASIC10.31□□□□□ -0.76
RNF213Q63HN8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 AC079602.3-201ENST00000623931 403 ntBASIC10.31□□□□□ -0.76
RNF213Q63HN8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
RNF213Q63HN8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RNF213Q63HN8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 AL591424.1-201ENST00000442569 1213 ntBASIC10.3□□□□□ -0.76
RNF213Q63HN8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 MIR6752-201ENST00000618442 71 ntBASIC10.3□□□□□ -0.76
RNF213Q63HN8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 AC018553.1-201ENST00000616682 1458 ntBASIC10.3□□□□□ -0.76
RNF213Q63HN8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RNF213Q63HN8 AC015922.1-201ENST00000421102 1152 ntBASIC10.3□□□□□ -0.76
RNF213Q63HN8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
RNF213Q63HN8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RNF213Q63HN8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
RNF213Q63HN8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC10.29□□□□□ -0.76
RNF213Q63HN8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms